Oryza glaberrima (African rice): 127771005
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Entry
127771005 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127771005
KO
K20241
WD repeat-containing protein 44
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127771005
Membrane trafficking [BR:
ogl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127771005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
KNTC1_N
Beta-prop_DCAF12
WDR54
Motif
Other DBs
NCBI-GeneID:
127771005
NCBI-ProteinID:
XP_052152756
UniProt:
I1PQY3
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Position
4:30713248..30718808
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AA seq
816 aa
AA seq
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MPEAAAAAAGHMDPVGDEAAERREMEEKEEEEEEDEEFYESLDRILSSSCSSTSASDDDD
QQHRRRRRHHPQPQQLSSSATFSAYEVWISEPTSVEERRRVLLRRLGLAHDSEPLPHPSP
RVSSSSPRSPTPSPPSSSPPRPAPVVAAAEEPRSSGHGKPPLARNPSGGAEQCRIRNLDD
GTEFEVGEVHDEVVREVGTGRQLTFEEFELCIGRSPIVQELMRRATTAASSSTSDHAAPA
SKPRRKPGGWLRGIRHLAGSVAYGRSSTDERDKEKEKEKKEREARRLSSATDDSLDGNGS
RNAGRVRVRQYGKACKELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIHVWEV
SEGERKGELLGEGTVARENGGGCSPFLAAVGNGSPELATLSLSCADGGFVEKKRRPRMQS
SRKSVGSDHLVVPECVFGFRDKPVCSLLGHAADVLDLSWSKSQYLLSSSMDKTVKLWDIT
TSTCLKTFSHTDYVTCIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEMVTAAC
YSPDGQVALVGSHKGSCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSSSEV
LITSADSRIRVVNGDELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHVYVWRHDNTS
HPSRSRSAVDVTNSYEHFHCHDVTVAITWPGAESRGSFGSRSSRNSDSDDVVMNTGRDAP
VENSEHDLNGTVNRCTKRPVCEGVASTSNPPADGVSTSWPDEKQSSAKSSPGHCSSDLCI
GALDVQRRSAWGLVIVTAGRGGEIRVFQNFGFPVQV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggctgcggcggcggcggcgggccacatggatccggttggcgacgaggcggcg
gagaggagggagatggaggagaaggaggaggaggaggaggaggatgaggagttctacgag
tcgctggatcggatcctgtcgtcgtcgtgctcgtccacgtccgcctccgacgacgacgac
cagcagcaccggcggaggcggcggcaccacccgcagccgcagcagctgtcgtcgtccgcg
acgttctccgcgtacgaggtctggatctccgagccgacatccgtcgaggagcgccgccgc
gtgctgctgcgtcggctcggcctcgcccacgactccgagcccctgccgcacccgtcccca
cgcgtatcatcctcctcccctcgttcgccgaccccttcccccccgtcctcgtcgccgcca
cggccggctcccgtggtggccgccgcggaggagcccagatccagcggccacgggaagccg
ccgcttgcgaggaacccgagcggcggcgcggagcaatgccggatccggaacctggacgac
ggtacggagttcgaggtcggggaggttcacgatgaggtggtccgggaggtcggcactggc
cggcagctcaccttcgaggagttcgagctctgcattggccgctccccgatcgtccaagag
ctcatgcgccgggccaccacagccgcatcatcctccacctccgaccacgccgccccagca
tccaagccacggaggaagcctggaggctggctgcgtggcatccggcacctggcgggaagc
gttgcatacgggcgcagcagcaccgatgagagggacaaggagaaggagaaggagaagaag
gagagggaagcgcggcgcctgagctccgccaccgatgacagccttgacggcaacggctcg
cgcaatgcagggagggtcagggtgcggcagtatgggaaggcgtgcaaggagctcaccggg
ctgttcatgacacaagaattggctgcccattcgggctcaatctggtgtatcaacttcagc
ttggatggacgataccttgcaagcgctggcgaggaccgtgtcatccatgtgtgggaggta
tcagagggagaaagaaagggagaattgctcggggaaggtacggtggcaagggagaacggt
ggtggctgcagcccgtttcttgcagctgttgggaatggatcgccggagctggcgacattg
tcattgagctgtgctgacgggggttttgtggagaagaagaggaggccaaggatgcaaagc
agccggaagtctgttggctctgatcatctagttgtgcctgaatgtgtgtttgggttcaga
gataaaccagtatgctctctattgggtcacgccgccgatgttcttgatctatcatggtcc
aaatctcagtacttgctttcatcctcaatggacaaaactgttaaactatgggacattact
actagtacctgtctgaaaacattttcacacacagactatgtgacttgcatccagttcaat
cccgtggatgataacttcttcattagtggatcactggatgaaaaagtacgcatttggaat
gtacatgatcgtaagattgaggattggaatgatcttcatgagatggtcactgctgcgtgt
tactcccctgatggacaggttgcactggtgggatcacacaagggaagctgtcatttattt
gatacaactgaaaagaagcttcagtacaaaagtcagatagaactaagaatcaggaagaag
aagtctggccagaagaagataactggcttccagtttgctcctggaagctcgtcggaagtc
ctgattacctctgcagattcaagaatccgtgttgttaatggtgatgaactcgttcacaaa
tttaaagggttccgaaatacaagtagccaaatatccgcttctgtagctccaaacgggaaa
tatgtggtctgtgccagtgaggactcccacgtgtatgtctggaggcatgacaatacttcc
catccgagcagaagcaggagtgcagttgatgtaaccaactcatatgagcatttccattgc
catgatgtcactgtggctatcacatggcccggcgctgaatcccgtggctcattcgggtcc
cgtagcagcagaaacagtgattcagacgatgtagtgatgaacacgggtcgggatgcccct
gtagagaacagtgagcatgatctgaatggcactgtcaatagatgcaccaagcgcccagtt
tgtgaaggtgttgcaagcacaagcaatcctccagcggatggagtatcaacgtcctggcct
gacgagaaacaatcgtctgccaagagcagtcctggtcactgctcatccgacctttgcatt
ggagctttggatgttcagcgccggtcagcttggggattggtgattgtcactgcaggaagg
ggtggtgaaattagggtgttccagaatttcggcttcccggttcaagtgtaa
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