KEGG   Oryza glaberrima (African rice): 127771224
Entry
127771224         CDS       T08853                                 
Name
(RefSeq) cullin-3B-like
  KO
K03869  cullin 3
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127771224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ogl04121]
    127771224
   03400 DNA repair and recombination proteins [BR:ogl03400]
    127771224
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     127771224
DNA repair and recombination proteins [BR:ogl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     127771224
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 MarR_2
Other DBs
NCBI-GeneID: 127771224
NCBI-ProteinID: XP_052153040
LinkDB
Position
4:28946545..28951386
AA seq 731 aa
MNSQKKRSPKIEPFRHRVDADPKSFDKSWKKLEDAIREIYNHNASGLSFEELYRTAYNLV
LHKHGLKLYDKLTENLKGHLKEMCRSIEDAQGSLFLEELQRRWADHNKALQMIRDILMYM
DRTFITTNKKTPVFDLGLELWRDIVVRAPKIHGRLLDTLLELIHRERMGEMINRGLMRST
TKMLMDLGSSVYHDDFEKPFLEVSASFYSGESQQFIECCDCGEYLKKAERRLAEELERVS
QYMDAKTADKITSVVDTEMLANHMQRLILMENSGLVNMLVDDKHEDLSRMYNLFKRVPDG
HSTIRSVMASHVKESGKALVSDPEKIKDPVEFVQRLLNEKDKYDEIISISFSNDKAFQNA
LNSSFENFINLNNRSPEFISLFVDDKLRKGVKGANEEDVETVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTTSDEAERSMLVKLKTECGYQFTSKLEGMFNDLKTSHDTMQSFYA
NLSGDTDSPTISVQILTTGSWPTQPCTPCKLPPEIVDISEKFRAFYLGTHNGRRLTWQTN
MGNADIKATFGGRRHELNVSTYQMCVLMLFNSADGLTYGDIEQATGIPHADLKRCLQSLA
CVKGKNVLRKEPMSKDISEDDTFYYNDKFTSKLVKVKIGTVVAQKETEPEKLETRQRVEE
DRKPQIEAAIVRIMKSRRVLDHNSIITEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD
KVDRKMYRYLA
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgaactcgcagaagaagcgcagccccaagatcgagcccttccggcaccgcgtggatgcg
gacccaaagtccttcgacaaatcgtggaagaagctcgaggacgccatccgcgagatttac
aaccacaacgccagcggcctctccttcgaggagctgtacaggactgcttataacttggtt
cttcacaagcatggtctgaagctatatgataaactcacagagaatttaaaaggacacctg
aaagaaatgtgcagatcaatagaggatgcccaaggtagtttgtttctggaggaactgcag
agaagatgggctgatcacaataaggcactacaaatgatcagagatatactcatgtatatg
gataggacatttattacaactaacaaaaagacacctgtctttgaccttggtctagagttg
tggagagatatcgttgtccgcgctcccaaaattcatgggaggttgcttgacacactcctt
gaactcattcatagagagaggatgggtgagatgataaacagaggtctgatgaggagtacc
accaaaatgttgatggatctagggtcttctgtctatcatgatgactttgagaagccattc
cttgaggtatccgcaagtttctatagtggtgagtcacaacagttcattgagtgctgtgat
tgtggcgaatatctcaagaaagctgagagacggcttgctgaagagttggagcgtgtttct
cagtatatggatgccaaaaccgcagacaaaataactagtgttgtggacactgagatgctt
gccaatcacatgcagcggttgattcttatggagaattctggtcttgtgaatatgcttgtt
gatgacaaacatgaagaccttagcaggatgtacaacttgtttaaacgtgttcctgatggg
cattcaacaattagatctgtgatggcctctcatgttaaggaaagtggaaaggcattggta
tctgacccagagaagataaaggaccctgttgagtttgtccagcgtcttctaaatgagaaa
gacaagtatgatgagatcataagtatttcattcagcaatgacaaggctttccaaaatgct
ctgaattcctccttcgagaatttcatcaacttgaacaaccgatctcctgaattcatttcg
ctgtttgttgatgacaagctccggaaaggggtgaaaggggccaatgaagaggatgttgaa
actgtcttggacaaggtgatgatgctcttcagatatttgcaggagaaagatgtttttgag
aaatattacaagcaacacttggccaaacgtcttctatctgggaaaactacttctgatgaa
gctgagaggagtatgcttgtgaagctgaagacggaatgtggctaccagtttacgtcaaaa
ttggaaggcatgttcaatgatctgaagacatcgcatgatactatgcaaagtttttatgct
aatctctctggtgatactgatagcccaacaatatcagtccagatactcaccactgggtct
tggccaacacagccatgtaccccctgcaaacttccacctgaaattgttgatatatctgag
aaattccgggcattctaccttggcacccacaatggcaggagattgacatggcaaacaaac
atggggaatgcagatatcaaagcaacgttcggaggccgcaggcatgagttgaatgtctcg
acatatcagatgtgtgtcctgatgctgtttaattcagcagatggcttgacttacggtgac
attgagcaggccacaggtataccacatgctgatctgaaacgctgcctccagtctcttgct
tgtgttaagggtaagaatgtgctgcggaaggaacccatgagcaaggatatatctgaagat
gacactttctactacaatgacaagttcacaagcaagttggtcaaggtgaagattggcacc
gtggttgctcagaaagaaacagaaccagagaagttggaaactcgccagagagttgaggaa
gacaggaaacctcaaattgaggctgcaattgtcagaatcatgaagtccagaagagtcttg
gaccacaatagcataatcacggaggtgacaaagcagcttcaatcgcgctttttgccaaat
cctgttgtgataaagaaaagaatagagtccctgatcgagagggagttcttggagagggac
aaggtagataggaagatgtaccgttatcttgcatag

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