Oryza glaberrima (African rice): 127771291
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Entry
127771291 CDS
T08853
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
127771291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127771291
03029 Mitochondrial biogenesis [BR:
ogl03029
]
127771291
Membrane trafficking [BR:
ogl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127771291
Atg1 complex
127771291
Mitochondrial biogenesis [BR:
ogl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127771291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
127771291
NCBI-ProteinID:
XP_052153131
UniProt:
I1PNF5
LinkDB
All DBs
Position
4:complement(23650637..23656480)
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AA seq
520 aa
AA seq
DB search
MSSMSDSGTGGRGGAELMVEQFQLKVLHAVLAVRGPRPLQPAASASFRRRDRWFHLPLHD
PQPPPAAEGVEAPEAGEPLVVDILLAPAAAAGGGGGGAGGEVVERWTVVCEPWPDAAAGE
GIPVNRAYKRCMTMLRSVYATLRFLPAYRVFRLLCANLSYNYEMVHRVGSFAVPLSRDEE
AAMRSYQFVPVETQHGRLVVSVQYLPSLAAFNLEISSLSPSMLIADYVGSPAAEPMRAFP
ASLTGATGSAFPQALSNQPQRPHSWATPALWPQAPRQQARFSPPHLLNASPTPSPPNFPS
GYLQSRPKGGSAPMSIPQVGDRRSPIHRPITLPPPSPRRVGETGTSSAQQSPSERCPSFG
RADGFRIMDPYASLSPGRKGKDTKDESGRFSALSSCDSPRQDDIDDADYPFAVDDVDTPS
SQPGSSDGKEARDQASSSSHKSQDAAVGSLVHLLKTARPLRNSNCPSQASAVESSEAAST
SSVVSRRKSDALEELQSFKEIKERLMSRSRAKQQEPPEKP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatgtcggactcggggacgggcggccgcgggggcgcggagctgatggtggag
cagttccaactaaaggtgctccatgccgtgctcgccgtgcgcgggccgcgcccgctgcag
ccggccgcgtcggcgtcgttcaggcggcgggacaggtggttccacctcccgctccacgat
ccgcagcctccacccgcggcggagggagtggaggcgccggaggcgggggagccgctcgtg
gtggacatcctcctggctcccgccgcagccgccggcggcggcggcggcggagcgggcggg
gaggtggtggagagatggacggtggtgtgcgagccctggccggacgccgcggcgggcgag
gggatacccgtgaaccgggcgtacaagcgctgcatgacgatgcttcggtcggtgtacgcc
acgctccgcttcctgccggcgtaccgcgtcttccgcctcctctgcgccaacctatcctac
aactacgagatggtccaccgcgtcggctccttcgccgtgccgctctcccgcgacgaggag
gccgccatgcgctcctaccagttcgtccccgtcgagacgcagcacggccgcctcgtcgtc
tctgtccagtacctccccagcctcgctgccttcaatctcgagatctcctccttgtcgccc
tccatgctgatcgccgactacgtgggcagccctgctgccgagccaatgcgcgccttccca
gcttcgctcacaggagccacaggttccgctttcccgcaggcgctgtccaatcagccgcag
cgcccgcacagctgggcgacgccagcgctctggccgcaggcgcctaggcagcaagctaga
ttttcgccacctcatttgctcaacgcatcacccactccatcgccacccaattttcccagc
gggtatcttcaatctcgtcctaagggagggtctgcaccaatgagcataccacaggtgggt
gacaggaggagcccaattcaccggccgatcacattgccaccaccgtctccgaggagagta
ggggagacaggaacatctagtgcacaacagtctccatcagagagatgcccctcgtttggg
agggcagatggatttcgaataatggatccctatgcaagcttgtcgccaggacgcaagggc
aaggacactaaggacgaatctggcaggttctctgcactctcctcctgtgattcccctcga
caagatgatatagatgatgcagattatccctttgctgtggatgatgttgatacaccgagc
tcccagcctgggagcagtgatgggaaggaagctagagatcaggcaagttcgtcgtcccat
aaatcacaagatgccgcagttggctctctggtgcacctgctcaaaactgcacgccctctg
cgaaactctaattgtccatctcaagcatcagcggttgaatctagtgaagcagcctcaacc
agttctgtcgtgtcccgtaggaaatctgatgcactcgaagagctccaatcatttaaagaa
atcaaggagaggttgatgtcccggagtagagcaaaacagcaagagccaccagaaaaacca
tag
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integrated database retrieval system
