Oryza glaberrima (African rice): 127771670
Help
Entry
127771670 CDS
T08853
Name
(RefSeq) AP2-like ethylene-responsive transcription factor BBM1
KO
K09285
AP2-like factor, ANT lineage
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127771670
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Other transcription factors
AP2/ERF
127771670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP2
Motif
Other DBs
NCBI-GeneID:
127771670
NCBI-ProteinID:
XP_052153555
UniProt:
I1PMT5
LinkDB
All DBs
Position
4:22116627..22121048
Genome browser
AA seq
660 aa
AA seq
DB search
MASADNWLGFSLSGQGNPQHHQNGSPSAAGDAAIDISGSGDFYGLPTPDAHHIGMAGEDA
PYGVMDAFNRGTHETQDWAMRGLDYGGGSSDLSMLVGSSGGGRRTVAGDGGGEAPKLENF
LDGNSFSDVHGQAAGGYLYSGSAVGGAGGYSNGGCGGGTIELSMIKTWLRSNQSQQQPSP
PQHADQGMSTDASASSYACSDVLVGSCGGGGGAGGRASSHGQGLALSMSTGSVAAAAGGG
AVVAAESSSSENKRVDSPGGAVDGAVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDN
SCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGTTTTTNFPMSNYEKELEEMKHM
TRQEYIAHLRRNSSGFSRGASKYRGVTRHHQHGRWQARIGRVAGNKDIYLGTFSTEEEAA
EAYDIAAIKFRGLNAVTNFDMSRYDVKSILDSSTLPVGGAARRLKEAEAAAAAAGGGVIV
SHLADGGVGGYYYGCGPTIAFGGGGQQPAPLAVHYPSYGQASGWCKPEQDAVIAAGHCAT
DLQHLHLGSGGAAATHNFFQQPASSSAVYGNGGGGGGGNAFMMPMGAVVAAADHGGQSSA
YGGGDESGRLVVGYDGVVDPYAAMRSAYELSQGSSSSSVSVAKAANGYPDNWSSPFNGMG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcagataactggctaggcttctcgctctccggccaaggcaacccacagcat
caccagaacggctcgccgtctgccgccggcgacgccgccatcgacatctccggctcaggc
gacttctatggtctgccaacgccggacgcacaccacatcggcatggcgggcgaagacgcg
ccctatggcgtcatggatgctttcaacagaggaacccatgaaacccaagattgggcgatg
aggggtttggactacggcggcggctcctccgacctctcgatgctcgtcggctcgagcggc
ggcgggaggaggacggtggccggcgacggcggcggcgaggcgccgaagctggagaacttc
ctcgacggcaactcattctccgacgtgcacggccaagccgccggcgggtacctctactcc
ggaagcgctgtcggcggcgccggtggttacagtaacggcggatgcggcggcggaaccata
gagctgtccatgatcaagacgtggctccggagcaaccagtcgcagcagcagccatcgccg
ccgcagcacgctgatcagggcatgagcaccgacgccagcgcgagcagctacgcgtgctcc
gacgtgctggtggggagctgcggcggcggcggcggcgccgggggcagggcgagctcgcat
gggcagggcctggcgctgtcgatgagcacggggtcggtggccgccgccgcagggggcggc
gccgtcgtcgcggccgagagctcgtcgtcggagaacaagcgggtggattcgccgggcggc
gccgtggacggcgccgtcccgaggaaatccatcgacaccttcgggcaaaggacgtctata
taccgaggtgtaacaaggcatagatggacaggaagatatgaagctcatctgtgggataat
agctgtaggagagaaggccaaagtcgcaaggggagacaggtttatttgggcggttatgac
aaagaagataaggcggctcgggcttatgatttggcagctctaaaatactggggcacgacc
acaacaacaaatttcccaatgagtaattatgaaaaggagctagaggaaatgaaacacatg
accaggcaggagtacattgcacatcttagaaggaatagcagtggattttctcgtggtgca
tccaaatatcgtggtgttactaggcatcatcagcatgggagatggcaggcaaggataggg
cgagttgcaggcaacaaggatatctacctaggcaccttcagcaccgaggaggaggccgcc
gaggcgtacgacatcgccgccatcaagttccgcgggctcaacgccgtcaccaacttcgac
atgagccggtacgacgtcaagagcatcctggacagcagcacgctgccggtcggcggcgcg
gcgcggcggctcaaggaggcggaggccgccgccgccgccgcgggcggcggcgtgatcgtc
tcccacctggccgacggcggtgtgggtgggtactactacgggtgcggcccgaccatcgcg
ttcggcggcggcggccagcagccggcgccgctcgccgtgcactacccgtcgtacggccag
gccagcgggtggtgcaagccggagcaggacgcggtgatcgcggccgggcactgcgcgacg
gacctccagcacctgcacctcgggagcggcggcgccgccgccacccacaacttcttccag
cagccggcgtcaagctcggccgtctacggcaacggcggcggcggcggcggcggcaacgcg
ttcatgatgccgatgggcgccgtggtggccgccgccgatcacggcgggcagagcagcgcc
tacggcggtggcgacgagagcgggaggctcgtcgtggggtacgacggcgtcgtcgaccca
tacgcggccatgagaagcgcgtacgagctctcgcagggctcatcgtcgtcgtcggtgagc
gtcgcgaaggcggcgaacgggtacccggacaactggagctcgccgttcaatggcatggga
tga
DBGET
integrated database retrieval system
