Oryza glaberrima (African rice): 127771830
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Entry
127771830 CDS
T08853
Name
(RefSeq) protein PELOTA 1
KO
K06965
protein pelota
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127771830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127771830
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127771830
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Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
127771830
NCBI-ProteinID:
XP_052153732
UniProt:
I1PQI1
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Position
4:29774358..29782189
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AA seq
378 aa
AA seq
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MKLVYRNLARNGPGSVKLVPEEEDDLWHAYNLIVPGDTLQSVTVRKVLREMASGGRDAER
VRLKLEIVVESVDYDKEGSVLRVRGKNITENDHVKIGQFHTMELELKRQFTLTKELWDWL
ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITVTRARIETSIPRKHGPAIAGYES
ALKKFFEHVLQAFLKHIDFEVVQCAVIASPGFTKDQFRDYMHLEAARRDLRLIIENKQRI
VLAHAPSGYKHSLKEVLDSPSVMTLIKDTKAAQEVQALKDFFNMLTNDSARACYGPKHVE
IANERLAIQTLLITDNLFRNSDIATRQNYVRLVESVKKFGGTVHIFSSMHVSGEQLAQLT
GIAAILRFPLPDLEDIEM
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaagctggtgccg
gaggaggaggacgacctgtggcatgcctacaaccttattgttccgggggataccctccag
tccgtcactgtgaggaaagttctgagagagatggcatctggaggacgtgatgctgagcgt
gtgaggttaaagttggaaattgtagtcgagtctgtagattatgataaggagggatctgtc
ttgcgtgtacgtggaaaaaatatcactgagaacgatcatgtgaagattggacagtttcat
actatggagcttgagctgaagagacaatttactttgacgaaggaactttgggattggtta
gctcttgataccatccaacaagcatgtgacccaactgcaagtgctgatctagcagttatt
ctcatgcaagaaggacttgcacatttgttcctcattggtagaagcataacagtaaccaga
gcacgtattgaaacatctattcctcggaagcatggccctgcgattgctggttatgagtcg
gccctcaagaagttctttgaacatgttttgcaagctttcctgaagcatattgattttgaa
gtagtccaatgtgctgtaattgcaagcccaggttttactaaggatcagttccgcgattat
atgcatcttgaagctgcacggcgagacttaagattaataattgagaacaaacagcgcatt
gttcttgcacatgcaccttcaggttacaagcatagcctgaaggaagttttggatagccca
agtgtgatgacactaataaaagatacaaaggcggcgcaggaggtccaagctttgaaggac
ttcttcaacatgcttacaaatgattcagctcgagcttgttatggacctaagcatgttgag
attgcaaatgaacgtcttgctatccaaactcttttaataacagataatttgtttcggaac
tctgacattgcaacgaggcaaaattatgtgcgcttggttgaatcggtaaaaaaattcggt
ggcacagtgcacatcttttcttcaatgcatgtctctggtgaacagttggcgcagttgaca
ggaatcgcagctatacttcgatttcccttgccagatttagaggacattgagatgtga
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