Oryza glaberrima (African rice): 127771843
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Entry
127771843 CDS
T08853
Name
(RefSeq) E3 ubiquitin-protein ligase EL5-like
KO
K16286
E3 ubiquitin-protein ligase EL5 [EC:
2.3.2.27
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127771843
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127771843
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127771843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
FANCL_C
zf-RING_16
zinc_ribbon_16
zf-RING_4
Prok-RING_1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
127771843
NCBI-ProteinID:
XP_052153747
LinkDB
All DBs
Position
4:19325700..19327002
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AA seq
277 aa
AA seq
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MSALAVGDADGGVVSPGGGLQASPTVVVDGDVVLSGVVLVLVALAFVFVMHHFLAAMRRR
DSEAGSSSASSGRQRGGRGVMAGVVGIDAAKAGGQGGVDPAVLRALPVTVHRAEAAPPPP
PLECAVCLAEVEDGEAARFLPRCGHGFHAECVDLWLRSHPTCPLCRLAVVADAAAGAAPP
PLALPPAQPEPANYASATTTAQLPTNVLFWGSQGAVVTTTTSAAAAAASSSGGDEAAAAV
LVVVEVPGTTTTKPQGDSARVGGSLRRMWSRGALPRT
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgttggcggtgggagacgcggacggcggcgtggtctcgccgggaggagggttg
caggcaagtccgaccgtggtggtcgacggcgacgtcgtcctgtccggcgtcgtcctcgtc
ctcgtcgccctcgcgttcgtcttcgtcatgcaccacttcctcgccgcgatgcgccgccgc
gacagcgaggcggggtcgtcgtcggcgtcgagtgggcgccagcgcggcggccgtggcgtg
atggctggcgtcgtcggcatagatgccgccaaggctggcgggcaaggcggcgttgacccg
gcggtgctgcgggcgctgccggtgacggtgcacagggcggaggcggcgccgccgccgccg
ccgctggagtgcgcggtgtgcctcgcggaggtggaggacggcgaggcggcgcggttcctg
cccaggtgcggccacggcttccacgccgagtgcgtcgacctgtggctgcgctcccacccc
acctgcccgctctgccgcctcgccgtcgtcgccgacgccgccgccggcgccgcccctcct
ccgctcgctctccctcctgcgcagccggagccggccaactacgcgagcgcgacgaccacc
gcccagctgccgacgaacgtcctgttctggggatcgcagggcgcggtggtgaccaccacc
accagcgccgccgccgccgccgcctcgtcgtccggcggagacgaagcagcagcagcggtg
ctggtcgtcgtcgaggtcccgggcacgacgacgacgaagccgcagggcgactcggcgagg
gtgggcgggtcgctaaggaggatgtggagcagaggggctcttcctcgtacgtga
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