Oryza glaberrima (African rice): 127772088
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Entry
127772088 CDS
T08853
Name
(RefSeq) vacuolar protein sorting-associated protein 25
KO
K12189
ESCRT-II complex subunit VPS25
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127772088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127772088
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127772088
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
127772088
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127772088
Exosomal proteins of colorectal cancer cells
127772088
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ESCRT-II
WHD_CHMP7_1st
MMM1
WHD_GTF3C1
Motif
Other DBs
NCBI-GeneID:
127772088
NCBI-ProteinID:
XP_052154035
UniProt:
I1NQB7
LinkDB
All DBs
Position
1:complement(24437690..24441159)
Genome browser
AA seq
179 aa
AA seq
DB search
MQRLGDFRLPPFFNYPPYFTLQPVRETREKQVQLWKDLILDYCRSQKLYIISLEEDFPLF
SNPKIERSLSHEAKEVFLAALVNEGRAEWMDKGHKKCLILWLRIQDWANYILNFVKDNGL
EDSVMTVEEIRSGIETRGTELAGIDRGVLMRALKLLEQKGKAAIFKGTSADDEGVKFSA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggctgggggatttcaggctcccgcccttcttcaactacccgccttacttcaca
ttgcagcctgtgcgagaaacacgtgaaaagcaagtgcagctgtggaaagatctgatactt
gattattgtagaagtcaaaagctatatataatctccctagaagaagatttcccattgttc
tccaatccaaagatcgagagatctcttagccatgaagcaaaggaagtattccttgctgct
cttgttaatgaaggacgtgcagaatggatggacaaaggtcataagaagtgcctcattctt
tggttgcggatacaagattgggctaactacatattaaattttgtaaaggataatgggctg
gaagatagtgtaatgactgttgaagaaatacgttcaggaattgaaacacgtgggactgaa
cttgccggaattgaccgtggtgttctcatgagggctttgaagttactggaacagaagggc
aaagcagcgatttttaagggcacttcagctgatgatgaaggtgtaaaattttcggcttaa
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integrated database retrieval system
