Oryza glaberrima (African rice): 127772299
Help
Entry
127772299 CDS
T08853
Name
(RefSeq) ornithine decarboxylase 1A, chloroplastic-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00330
Arginine and proline metabolism
ogl00480
Glutathione metabolism
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
ogl04148
Efferocytosis
Module
ogl_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
127772299
09106 Metabolism of other amino acids
00480 Glutathione metabolism
127772299
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127772299
Enzymes [BR:
ogl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
127772299
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
127772299
NCBI-ProteinID:
XP_052154287
LinkDB
All DBs
Position
4:1997635..1999022
Genome browser
AA seq
410 aa
AA seq
DB search
MAGGRPLESVLVAPGVKGKKVLAFKRDGLKKNEAVTGLIHDIVASSSARSALHVLDLAKV
VDLYAGWRRALPGVRPFYAVKCNPDTALLGALAALSAGFDCASRAEIEAVLALGVPPAAI
VYANPCKPGAHVAFAAEAGVNVTTYDSEEEVAKVKRCHPSCELLLRIKAPDCGGVKVDLG
LKYGANPDEVLPLLRAARRAGLGVAGVSFHVGSGASRAAVYRGAIEAARAAFDAAAGLGM
PPMRVLDIGGGFVAGAAFGDAAAVINRALGRYFGDLLPTVEVIGEPGRYFAETAFTLAAR
VIGKRRRGDVREYWIDDGVYGSLNCILLDSYVPRPRPLAGARPGEETHASTVFGPTCDSI
NTVVTGYQLPEMSVDDWLVFDDMGAYTTAAGSSFNGFATSAINIYLAYSS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggctggaggaagacccttggagtcggtgctcgtggcccccggggtgaagggaaagaag
gtactcgcattcaagcgcgacgggctcaagaaaaacgaggcagtgacgggcctcatccac
gacatcgtcgccagctccagcgccaggagcgcgttgcacgtcctggacctcgccaaggtg
gtcgacctctacgcgggatggcgccgcgcgctccccggcgtgaggcccttctacgccgtc
aagtgcaacccggacacggcgctgctcggcgcgctcgccgcgctcagcgccggcttcgac
tgcgccagccgcgccgagatcgaggccgtcctcgcgctcggcgtcccgcccgccgccatc
gtctacgctaacccgtgcaagcccggcgcgcacgtcgcgttcgccgccgaggccggcgtc
aacgtcaccacgtacgattccgaggaggaggtggccaaggtgaagcgctgccaccccagc
tgcgagctgctgctccgcatcaaggcgccggactgcggcggcgtcaaggtcgacctcggc
ctcaagtacggcgccaacccggacgaggtgctgccgctgctgcgcgccgcgcgccgcgcg
ggcctcggcgtggccggcgtgtcgttccacgtcggcagcggcgcgtcccgcgcggccgtc
taccgcggcgccatcgaggccgcgcgcgcggcgttcgacgcggccgcggggctcgggatg
ccgccgatgcgcgtcctggacatcggcggcgggttcgtcgccggcgccgcgttcggcgac
gcggcggcggtcatcaaccgcgcgctcgggcgctacttcggcgacctcctccccaccgtc
gaggtgatcggcgagcccggccggtacttcgccgagaccgccttcacgctcgccgcgcgc
gtcatcgggaagcgcaggcgcggcgacgtgcgcgagtactggatcgacgacggcgtctac
ggctcgctcaactgcatcctcctggacagctacgtgccgcgcccgaggccgctcgccggc
gcgcgccccggcgaggagacgcacgcctcgacggtgttcgggccgacgtgcgactccatc
aacacggtggtgaccgggtaccagctgccggagatgagcgtcgacgactggcttgtgttc
gacgacatgggcgcctacaccaccgcggccggctccagcttcaacggctttgccacgtca
gccataaacatctacctggcatactccagctag
DBGET
integrated database retrieval system
