Oryza glaberrima (African rice): 127772586
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Entry
127772586 CDS
T08853
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127772586
Transcription machinery [BR:
ogl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
127772586
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
GerE
Motif
Other DBs
NCBI-GeneID:
127772586
NCBI-ProteinID:
XP_052154484
UniProt:
I1PYE3
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Position
5:25749444..25751764
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AA seq
500 aa
AA seq
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MASTVTTPSRPVSAGCHRRSPRRSAPVVLSLGGGPRRRTPSSTSCSALASPAKQGTAKLP
PPQPTASRTAAADAERERERTDYNEVAAALESIYKLSPAVVEEKDADEEDEKSKQTKRKR
KGRVGRSRNATVTVRSSRRRRRGQRMDLGKRVEMRRREEEEGGGGAGKVEDEERGFEEML
LREHAVSTDMGSLDWKRMKIPPVLTSAQSIRLFRIMQPMKAILEMKENLENEVQSEPNDA
QLAEAMNMSVLQMRRHLEVGRAARNKLIKHNLRLVLYTINKYYPDMSNDERFDDICQAGA
NGLITAIDRFEPKRGFRISTYALFWIRHSIVRAITLSNFTRFPFAMESERQEIHRAREEL
AFELGRAPTEEEVMKKVGLSPARYRDVVRMTRPTYSLHARNRVTQEELINEVTDDDAIGV
DTSSHNTLLRLAIDDLLDSLKPKESVVIRQRFGLDGRGKRTLSEIAGNLNISREMVRKYE
LKALMKLKHPTRVEYLRRYM
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccactgtgacgacgccgagccggccggtatccgctgggtgccaccggcgctcg
ccgcggcggtcagcgcccgtcgtgctctccctcggcggcggtccgcggcggcgcacgccg
tcgtccaccagctgctcggcgctcgcgtcgccggcgaagcagggcacggccaagctccct
ccgccgcagccgacggcgtcgaggaccgcggcggccgacgcggagcgggagcgggagcgg
acggactacaacgaggtggccgccgcgctggagagcatctacaagctgagccccgccgtg
gtcgaggagaaggacgccgacgaggaggacgagaagagcaaacagaccaagcggaagaga
aaaggcagagtggggaggagccggaacgcgacggtgacggtgaggagcagccggaggagg
aggcggggacagaggatggacctggggaagagggtggagatgaggaggagggaggaagaa
gagggcggcggcggcgccggcaaggtggaagacgaggagcgggggttcgaggagatgctg
ctccgggagcacgccgtgtccaccgacatgggcagcctcgactggaagcggatgaagatc
cctcccgtgctcacctccgcccagagcatccgcctcttcaggatcatgcagcccatgaag
gcgatcttggagatgaaggagaacctggagaacgaagtgcagagcgagccaaacgacgca
cagctcgccgaggccatgaacatgtccgttcttcagatgaggcgccatctcgaggtcggc
cgagctgccaggaacaagctcatcaagcataatctccggctggtgctgtacacgatcaac
aagtactacccggacatgtccaacgacgagaggttcgacgacatctgccaggcgggcgcc
aacggcttgatcacggcgatcgaccggttcgagcccaagcgcggcttccgcatctccacc
tacgccctcttctggatccgccactccatcgtccgcgccatcaccctctccaacttcacc
cgcttccccttcgccatggaatccgagaggcaggagatccacagggctcgggaggagctg
gcgttcgagctggggagggcgccgacggaggaggaggtgatgaagaaggtggggctgtct
ccggcgaggtaccgcgacgtggtgcggatgacgaggcccacctactccctccacgcgcgt
aacagggtcacccaggaggagctcatcaacgaggtcaccgacgacgacgccatcggcgtc
gacaccagcagccacaacaccctcctccgcctcgccatcgacgacctcctggattcgctg
aagcccaaggagagcgtggtgatccggcagaggttcgggctggacgggagggggaagcgg
acgctgagcgagatcgccggaaacctcaacatctcgagggagatggtgcgcaagtacgag
ctcaaggcgctcatgaagctcaagcaccccacgcgagtggaatacctgcgcagatacatg
tga
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