KEGG   Oryza glaberrima (African rice): 127772606
Entry
127772606         CDS       T08853                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03020  RNA polymerase
ogl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127772606
  09124 Replication and repair
   03420 Nucleotide excision repair
    127772606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogl03021]
    127772606
   03400 DNA repair and recombination proteins [BR:ogl03400]
    127772606
Transcription machinery [BR:ogl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     127772606
  RNA polymerase III system
   RNA polymerase III
     127772606
  RNA polymerase I system
   RNA polymerase I
     127772606
DNA repair and recombination proteins [BR:ogl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127772606
SSDB
Motif
Pfam: DNA_RNApol_7kD YjdM_Zn_Ribbon DUF5816 zinc_ribbon_13 OrfB_Zn_ribbon HypA
Other DBs
NCBI-GeneID: 127772606
NCBI-ProteinID: XP_052154515
LinkDB
Position
5:2574972..2577355
AA seq 95 aa
MAAKSRVRIRQVYTVASSHAPAVDAPPCACSRRLASGRPPLRPMDPQQPEPVSYLCGDCG
AENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 288 nt   +upstreamnt  +downstreamnt
atggctgcgaaatcccgagtccgaattcgacaggtatataccgtcgcctcctctcacgcc
ccagccgtcgacgcgccgccctgcgcctgcagccgtcgtcttgcctccggccgtccgccg
ctgcgtccgatggatccgcaacaacctgagcccgtcagctatctctgtggagattgtgga
gctgagaacacactgaagccaggagatgtgatccagtgccgtgaatgtggctatcgcatc
ctctacaagaagcgcacccgccggattgttcaatatgaagcgcgctga

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