Oryza glaberrima (African rice): 127772919
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Entry
127772919 CDS
T08853
Name
(RefSeq) auxin response factor 4
KO
K14486
auxin response factor
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127772919
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
127772919
NCBI-ProteinID:
XP_052154873
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Position
1:37357880..37363111
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AA seq
808 aa
AA seq
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MPPAAMAPPPPPQGSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQ
VADSQMRLYDLPSKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPV
QARPPVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWR
FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSS
VISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFR
MRFEGEEAPEQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPAS
SPPVNPLPLSRVKRPRPNAPPASPESPILTKEAATKVDTDPSQAQRSQNSTVLQGQEQMT
LRSNLTESNDSDVTAHKPMMWSPSPNAAKAHPLTFQQRPPMDNWMQLGRRETDFKDVRSG
SQSFGDSPGFFMQNFDEAPNRLTSFKNQFQDQGSARHFSDPYYYVSPQPSLTVESSTQMH
TDSKELHFWNGQSSVYGNSRDQPQNFRFEQNSSSWLNQSFARPEQPRVIRPHASIAPVEL
EKTEGSGFKIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSLNQLQPVQTDCIPEVSVS
TAGTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELK
AELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKM
NSKSNAPRKDDSSENEKGHLPMPNKSDN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggccgccatggctccccctcccccgccgcagggctcctccacaggggatccg
ctctacgacgagctgtggcacgcctgcgcggggccgctcgtcaccgtgccgcgggtgggc
gacctcgtcttctacttcccgcaggggcacatcgagcaggtcgaggcgtccatgaaccag
gttgccgacagccagatgcgcctctacgatctgccctccaagctgctttgccgtgtcctc
aacgtcgagctcaaggcggagcaagacaccgacgaggtctacgcgcaggtcatgctcatg
ccggagcccgagcaaaatgagatggcggtggagaagacgactcctacgtccggccctgtg
caggcaaggccgccggtgaggtccttctgcaagacgctcaccgcgtctgacaccagcacg
cacggcggcttctctgtactccgccgccacgctgatgagtgcctccctcccctggatatg
acccagtcgccacccacacaggagctcgtggccaaggatctgcacagcatggactggcgc
ttccgtcacatctttcgcgggcaaccgaggaggcatctccttcagagtggttggagtgtg
tttgtcagttccaaaaggcttgttgctggggatgctttcattttcctcagaggagagaat
ggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaatgtgccttcttca
gtcatatctagccaaagcatgcacctgggagtccttgctactgcatggcatgctatcaac
acgaagagtatgttcaccgtctactacaaacctaggacgagcccttcagagttcattata
ccatatgatcagtatatggagtccgtcaaaaacaattactctgttgggatgaggttcagg
atgaggtttgaaggagaagaggcaccagagcagaggtttactggtactataattggcagt
gagaatctcgacccagtgtggcctgaatcaagttggagatccctgaaggtgcggtgggat
gaaccatcaactattccgcggccagatagagtctctccttggaaaatagagcctgcttca
tcacctcctgttaacccccttcctctttctagggttaaaagacctaggccaaatgctcct
ccagcatctcctgaatctcctattcttacgaaagaagctgctactaaggttgacactgat
ccttctcaagcacaacgaagtcaaaacagtacggtcttgcaaggtcaagaacaaatgacc
ttgaggagcaaccttactgagagtaatgactctgatgtcactgctcataagccaatgatg
tggtctccatccccaaatgctgcaaaagcccaccccttgacatttcagcagagaccccct
atggataattggatgcagttgggaaggcgtgaaactgactttaaggatgtccgttctggc
tctcaatcttttggtgattccccaggcttctttatgcagaattttgatgaggctcctaac
cgtcttacttctttcaagaaccagtttcaggatcaaggttctgctcggcacttctctgac
ccatactactatgtatctccacagccttccctaactgttgaatcaagcacacagatgcac
acagacagtaaggagttacatttctggaatggccagagtagtgtgtatggtaattcgaga
gaccaaccacagaatttcagattcgaacagaactcatcaagttggttaaatcagtcattt
gcccgacctgaacagccaagagtgattagaccgcatgcatcaatagctccagttgagttg
gaaaaaacagaaggcagtgggtttaagatttttgggtttaaagttgatacaaccaatgct
cctaacaatcacttgagctccccgatggctgcaacacatgagcctatgcttcaaactcca
tcatcattgaatcagttgcaacctgtacaaactgattgcattcctgaggtatcagtaagc
acagctggaacggcgactgagaatgagaaaagcggtcagcaagctcaacagagttcaaaa
gatgttcaaagcaagactcaggttgcttcgacgaggagttgtacaaaggtccataagcaa
ggcgttgcacttggcagatctgtggatctttcaaagttcagtaactatgatgaactcaaa
gctgagctagacaagatgtttgaattcgatggtgaattggtgtcttcaaacaaaaactgg
caaattgtttatactgataatgagggtgatatgatgcttgttggagacgacccatgggaa
gaattctgcagcattgtgcggaagatttatatttacaccaaggaggaggtccagaagatg
aattcgaaatcaaatgccccaaggaaagatgactcttcagaaaatgagaaaggtcatctg
ccgatgcccaacaaatcagataactag
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