Oryza glaberrima (African rice): 127773014
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Entry
127773014 CDS
T08853
Name
(RefSeq) probable DNA helicase MCM8
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogl03032
]
127773014
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127773014
Enzymes [BR:
ogl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127773014
DNA replication proteins [BR:
ogl03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
127773014
DNA repair and recombination proteins [BR:
ogl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127773014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
127773014
NCBI-ProteinID:
XP_052154986
LinkDB
All DBs
Position
5:19905685..19914493
Genome browser
AA seq
789 aa
AA seq
DB search
MYDDGPRKGKPGGLSMDAATAAGLAAVWPEYFPEESEFAADGRSARLAADLVDLFSSPDA
SDLLSRVEDDGDILSLPVDFQQLSNLTWITEALQENPKEALLSMGAAVHLIVCASRDLQL
GDINKINIRLYNHTKTIALKNLKAAYIKKLVTVRGTVLKVSTVKPLVLQLNFQCMKCATK
FPRVFCDGKFSPPVSCSIQGCKSRTFIPMRSTAKLMDFQKIRIQELASGESHEEGRVPRT
IECELTEDLVDCCIPGETVTVTGIVKVLNNYMDVGGGKSKSRNQGLYYLYLEAISVRNSK
VHAASGNSDAASGSFGFQAFTEKDLEFISKFKEEHGADVFRQILHSFCPSIYGHELVKAG
ITLALFGGVQKHSIDQNKVPVRGDIHAVVVGDPGLGKSQLLQAAAAVSPRGIYVCGNTTT
NAGLTVAVVKDSMSNDYAFEAGAMVLADRGICCIDEFDKMSAEHQALLEAMEQQCVSVAK
AGLVASLSARTSVLAAANPVGGHYDRAKTVNENLKMSAALLSRFDLVFILLDKPDELLDK
RVSDHIIALHSNDGGPFTANKRIRTVPQFNVSTEFGVGRTSLASRLRLHPEKDKDFCPLP
GPLLRKYISYARSHVNPRISMPSPAADSLQKFYLDLRKQSDSADGTPITARQLESLVRLA
EARARVDLREEVTLEDAKEVIDIMTESLYDKCVDEHGVVDFARSGGMSNQKQSKKFLRAL
NEQCDLQKKDCFSMNEMYSLADRISLQVANLDAIVESLNNAGYITKKGSSMYQVVTSSYQ
GSQATWSRR
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgatggtcctcgcaagggcaaacccggcggcctctccatggacgccgccacc
gccgcggggctcgcggcggtctggccggagtacttcccggaggagagcgagttcgccgcg
gacggccgcagcgcgcgcctcgccgccgacctggtcgacctcttctcctcccccgacgcg
agcgacctcctctcgcgagtcgaagatgatggtgatatcctctcccttccagttgatttc
cagcagctatcgaatttgacctggattactgaagctctccaggaaaatccaaaagaagcc
ttgctttccatgggagctgcagttcatctgattgtgtgtgctagcagggacttgcagttg
ggcgacatcaacaaaatcaatatcaggctttacaaccacaccaagactattgccttgaag
aatttaaaagcggcgtatattaagaaacttgtgacagtgcgtggaacagtcttaaaagta
agtacggtgaagcctctagtgctgcagctgaatttccaatgcatgaaatgcgctacaaaa
ttccctcgtgtgttctgtgatgggaagttttcacctccagtatcgtgcagtattcaggga
tgcaagagcagaacattcataccaatgagatctactgcaaagttgatggattttcagaaa
ataaggatacaagagcttgctagtggtgaaagccatgaagaaggcagagtgccacgaact
atagagtgtgagcttacagaggatcttgtagattgttgcatccctggagagactgtaaca
gttactggaatcgtcaaagtactgaacaactacatggatgttggaggagggaaatccaaa
agcaggaaccaaggtttatactacctgtacctggaagcaatttcagtaagaaactcaaag
gtccatgctgcttcaggaaattcagatgctgctagtggatctttcggttttcaagctttt
actgaaaaggatcttgaattcatctccaaatttaaggaagaacacggtgctgatgttttt
cgtcaaattcttcactccttttgcccctctatctatggacatgaacttgtaaaagctggt
atcacccttgcgcttttcggtggtgtgcagaagcactccattgatcaaaacaaggtccca
gtgagaggagacattcatgctgttgttgttggtgatcctggactaggcaagagtcaactg
ctacaggctgcagcagctgtttctccacggggtatatatgtttgtgggaatacaacaaca
aatgctggtctaactgttgctgtggttaaagattctatgtcaaatgattatgcatttgag
gctggtgccatggtccttgctgaccgtggaatatgctgtatcgatgagttcgataaaatg
tcagcagagcatcaggctttactggaagccatggagcagcaatgtgtatctgtggcaaag
gctggccttgtggcaagtttatcagcccgtacttctgtgctagcggctgctaatcctgtt
ggtggtcattacgaccgagcaaaaacagtgaatgagaatttaaagatgagtgccgccctc
ctctctcggtttgacttggttttcattttacttgacaagccagatgaattgctggataag
agagtatcagatcacataattgcactccactccaatgatggaggccctttcacagccaac
aagaggataagaacagtgcctcaatttaatgtcagtacagagtttggtgtcggtagaact
tcattagcttcaaggctgagattgcaccctgagaaagacaaggatttctgtccattacct
ggaccattacttcgcaagtatatatcttatgcaagaagccatgttaacccccgaatctcc
atgccgtcgccagcagctgacagtctgcaaaagttctatttggatttgagaaaacaaagt
gattctgctgatggtacgcccatcacagcccggcaactggaaagccttgtaaggttggca
gaagctcgtgcgcgggtggatctaagagaagaagtgactttagaagatgctaaggaggtc
atagacataatgacggaatccttatatgacaagtgtgttgatgagcacggtgttgtggac
tttgctcgaagtggtgggatgagcaatcaaaagcaatcaaagaaatttctccgcgcctta
aacgagcagtgtgatttgcagaaaaaggattgcttttcaatgaatgagatgtacagctta
gctgatcgtatcagcttgcaagttgcaaatttagatgctattgtggaaagtttgaacaat
gctggctatatcactaaaaagggatcatcaatgtatcaggtagtgacttcgtcataccag
gggagccaagctacatggtcaagacgatga
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