Oryza glaberrima (African rice): 127773119
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Entry
127773119 CDS
T08853
Name
(RefSeq) beta-hexosaminidase 3-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00511
Other glycan degradation
ogl00513
Various types of N-glycan biosynthesis
ogl00520
Amino sugar and nucleotide sugar metabolism
ogl00531
Glycosaminoglycan degradation
ogl00600
Sphingolipid metabolism
ogl00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ogl00604
Glycosphingolipid biosynthesis - ganglio series
ogl01100
Metabolic pathways
ogl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
127773119
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
127773119
00513 Various types of N-glycan biosynthesis
127773119
00531 Glycosaminoglycan degradation
127773119
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
127773119
00604 Glycosphingolipid biosynthesis - ganglio series
127773119
00511 Other glycan degradation
127773119
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127773119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ogl03110
]
127773119
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
127773119
Chaperones and folding catalysts [BR:
ogl03110
]
Intramolecular chaperones
Others
127773119
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
127773119
NCBI-ProteinID:
XP_052155103
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Position
5:17667544..17672678
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AA seq
554 aa
AA seq
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MMAPAMALRLLVVAVVAAVVSCAVAADEGSVVEVWPMPATASKGGQTLHVSRELRMTAEG
SKYADGEAILKDAFQRMVTLIELDHVINGSSQGLPLLAGVNVVVHLPGDELNFGVDESYN
LSVPATGNPIYAQIEAQTVFGALHALETFSQLCNFDFTSRLIELQSAPWSITDMPRFPYR
GLLIDTSRHYLPVPVIKSVIDSMTYSKLNVLHWHIVDEQSFPIEIPSYPKLWNGAYSYSE
RYTMDDAIDIVQYAERRGVNVLAEIDVPGHALSWGVGYPSLWPSATCKEPLDVSSESTFQ
VINGILSDFSKVFKFKFVHLGGDEVNTSCWTSTPRVKAWLAQHGMKESDAYRYFVLRAQK
IAKSHGYEVINWEETFNNFGDKLDRRTVVHNWLGGGVAEKVVAAGLRCIVSNQDKWYLDH
LEVTWDGFYMNEPLRNIKNPAQQKLVLGGEVCMWAEHIDASDIQQTIWPRAAAAAERLWT
PFEKLSKEWEIAALSARLARFRCLLNHRGIAAGPVTGYGRSAPAEPSSCIKQHPFNRCKQ
KQSKEKAGANVTEL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgccggcgatggctctgaggttgctggtggtggcggtggtggcggcggtggtg
tcctgcgccgtcgccgccgatgaggggagcgtcgtcgaggtgtggccaatgccggcgacg
gcgagcaaaggcgggcagacgctgcacgtcagcagggagctcaggatgacggcggagggg
agcaagtacgccgacggggaggccatcctgaaggacgcgttccagaggatggtgacgctg
atagagctggaccacgtcatcaatggcagctcccagggcttgccgctgctcgccggtgtg
aatgtcgtcgtgcatttgcccggcgatgagctcaattttggggtggatgaatcatacaat
ttgtcagtgcctgcaactggaaatccaatttatgctcaaattgaggcccagacagttttt
ggagcacttcatgccttggagacgtttagccaattgtgtaactttgatttcacctcaagg
ttaattgaacttcagtctgccccttggagcatcacggacatgcccagatttccttatcga
gggcttcttattgatacttcaaggcattaccttcctgtcccagtaataaaaagcgtaatc
gattcaatgacctacagcaagttgaatgttcttcattggcatatcgtggatgaacagtca
tttcctatagaaataccttcatacccaaaattatggaatggtgcatactcttactcagag
agatatacaatggatgatgctatcgacattgttcagtatgctgaacgacgaggtgtcaat
gtcttagctgagattgatgttcctggccatgctctctcatggggtgttggttatccgtcg
ttgtggccatcagctacttgtaaagaaccacttgatgtcagcagcgaatctacattccaa
gtgattaatggaattctttcagatttcagcaaggtttttaagttcaagtttgtccatttg
ggaggtgatgaggtcaatacaagttgctggacttccacaccacgcgttaaagcatggttg
gcccaacatggtatgaaagaatctgatgcctacagatattttgtattgagagctcaaaag
atagcaaaatcacatggctacgaagttattaactgggaagaaacctttaacaactttgga
gacaaactagaccgcagaactgtggtgcataactggcttggaggtggagttgcagagaaa
gttgttgctgctggtttgagatgcattgtgagcaaccaggataagtggtacctagatcac
ttggaagttacatgggatggattttatatgaatgaaccactgagaaatatcaagaacccg
gcacagcagaagttggttcttggtggtgaggtatgcatgtgggctgaacacatagatgcg
tctgacattcagcaaaccatttggccacgtgctgcagcagctgcagagcggttgtggact
ccgtttgagaagctttcaaaggagtgggaaatagcagcgctcagcgcaagactggcacgc
ttcaggtgcttgctgaatcatagagggatcgctgctggaccggtaactggttatggacgt
tccgcgccagcagagccaagctcctgtataaagcaacacccatttaaccgctgtaagcag
aagcagtcaaaggaaaaggctggggccaatgtaactgaactctga
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