KEGG   Oryza glaberrima (African rice): 127773140
Entry
127773140         CDS       T08853                                 
Name
(RefSeq) importin subunit beta-1
  KO
K14293  importin subunit beta-1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127773140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ogl03009]
    127773140
   03036 Chromosome and associated proteins [BR:ogl03036]
    127773140
Ribosome biogenesis [BR:ogl03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    127773140
  Pre-60S particles
    127773140
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    127773140
SSDB
Motif
Pfam: TPR_IMB1 HEAT_EZ HEAT IBN_N HEAT_GCN1 TPR_IPO5 HEAT_MROH2B_C CEP104-like_TOG HEAT_GCN1_C_2 TPR_SYO1 PDS5 TPR_DNAAF5 Vac14_Fab1_bd ARM_TBCD_2nd GNC1_N MMS19_N ARM_ARMC5
Other DBs
NCBI-GeneID: 127773140
NCBI-ProteinID: XP_052155124
UniProt: I1R8R4
LinkDB
Position
5:14176807..14181564
AA seq 868 aa
MNITQILLSAQSADGNLRAVAEGNLKQFQEQNLPNFLLSLSVELSDNEKPPESRRLAGII
LKNSLDAKDSAKKELLIQQWVSLDPSIKQKIKESLLITLGSSVHDARHTSSQVIAKVASI
EIPRREWQELIAKLLGNMTQQGAPAPLKQATLEALGYVCEEISPEHLEQDQVNAVLTAVV
QGMNQTELSPEVRLAAVKALYNALDFAESNFANEMERNYIMKVICDTAVSKEVEIRQAAF
ECLVAIASTYYVHLDPYMQTIFNLTANAVKGDEEAVALQAIEFWSTICDEEIELQEEYEG
SDDANSTVNYRFIEKALPSLVPMLLETLLKQEEDQDQDDNVWNISMSGGTCLGLIARTVG
DAIVPLVMPFVEGNITKPDWHCREAATFAFGSILEGPSVEKLAPLVQAGLDFLLNTTKDP
NSQVRDTTAWTLGRVFELLHSPASANPIITSANLTRIMTVLLESSKDVPNVAEKVCGAIY
FLAQGYEDAESISSVLTPFLPNLIAALLSAADRADTTHFRLRASAYEALNEIVRVSNISE
TSGIIGQLLQEIMRRLNLTFDLHILSSGDKEKQSDLQALLCGVLQVIIQKLSSSDAKSII
AQTADQLMFLFLRVFACHSSTVHEEAMLAIGALAYATGTDFVKYMPEFFKYLEAGLQNYE
EYQVCSISVGVVGDICRALEDKILPFCDGIMTVLLKDLSNSMLNRSVKPPIFSCFGDIAL
AIGDNFEKYLPYAMPMLQGAAELLAVLDHTDEDMVDYGNQLRRGIFEAYSGILQGIKGAK
AQLMIPYASHLLQFTEAVYKDRSRDESVTKAAVAVLGDLADTLGSSSKDLFKSNLFHVEF
LRECHDLDDEVRDTASWAQGMINQALVS
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgggcagta
gcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctctccttg
tcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggtattatc
cttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcagcaatgg
gtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataacgctagga
tcttcggtgcatgatgctaggcatacctcatcacaagtcattgccaaggttgcatccatt
gagatcccccggcgtgaatggcaagaactcattgccaaattattgggcaacatgacacaa
cagggtgcacctgctccactaaagcaagcaactctagaggccttagggtatgtctgtgag
gagatttctcctgaacacttggagcaggatcaggtgaatgctgttctaactgctgttgtc
cagggaatgaaccagacagagctaagccctgaagtccgtcttgcagcagttaaagcccta
tataatgctcttgattttgctgagagcaactttgcaaatgaaatggaaaggaattatatc
atgaaggtaatttgtgatactgctgtatcgaaggaagtggagatcaggcaggcagccttt
gaatgccttgttgcaattgcttccacatattatgtacacttggatccttatatgcaaacc
attttcaacctgacagctaatgctgtcaaaggagatgaggaagcagttgcacttcaagct
attgagttctggagcactatttgtgatgaagagattgagctccaagaagaatatgaggga
tctgatgatgctaattctactgtaaattatcgcttcattgagaaggccctcccttcactt
gttccgatgctgctagaaactctgttaaagcaagaggaagatcaagatcaggatgataat
gtatggaacatttccatgagtggtgggacatgccttgggctcattgctagaactgttggt
gatgcgattgtgcctcttgtgatgccttttgttgagggtaacatcacaaaaccagattgg
cattgtcgtgaggcagctacttttgcatttggttctatccttgaaggtccatctgtggag
aaacttgctcccctggtacaggctgggcttgacttcctgctgaacacaacaaaagacccg
aatagtcaggtaagggacaccactgcatggactcttgggagggtatttgagctcctgcat
tctccagccagtgcaaatccaattataacaagcgcaaaccttactcgtatcatgactgtc
ttgctggaaagtagtaaggatgttccaaatgtggctgagaaagtctgtggagccatatat
tttcttgcccaaggttatgaagacgcagagtcgatttcatctgtgcttacaccttttctt
cctaatctcattgctgctctcctttctgcggcggatcgtgctgataccacccacttcagg
cttcgtgcgtcagcttatgaagcattgaatgagattgtgagagtcagcaacatatctgaa
acgtcaggcattataggtcagttactgcaggagatcatgaggagattgaatctgacgttt
gatctccatatactttcatctggtgacaaggaaaagcaaagtgatcttcaggcattactg
tgtggtgtactgcaggtcatcattcagaaattgagcagctcggatgctaagtcaataatt
gcccagactgctgatcagttgatgtttctgtttctgcgtgtttttgcttgccacagctct
actgtacacgaagaagcgatgcttgccatcggtgctcttgcttatgccactggtacagat
tttgtgaaatacatgcctgagtttttcaagtatctggaagctggcttgcagaattatgaa
gagtaccaagtctgttccatctctgttggagtggtgggtgatatttgccgtgccttggaa
gataaaattttgcccttctgtgatgggattatgactgttcttctcaaggacctgtcaaac
tcgatgcttaatcgttctgtgaagcctccgattttctcatgctttggagacattgctctt
gctattggtgataattttgagaaataccttccttatgctatgccaatgcttcaaggagct
gccgaacttcttgctgttttggaccatacagatgaggatatggttgattatggtaaccag
ctcagacggggaatctttgaagcttactctggcatactccagggtataaagggtgcaaaa
gctcagttgatgataccctatgcaagccatctattgcagttcactgaagctgtctacaag
gaccgcagcagggatgagagcgtgacaaaggctgcagttgctgtcctgggggatcttgcg
gacacactcggctcaagctcaaaggatctgttcaaaagcaacctcttccatgttgagttc
ctgagggagtgccacgatttggatgatgaagttagggacaccgcgtcatgggcccaggga
atgataaaccaagcactggtttcttaa

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