Oryza glaberrima (African rice): 127773140
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Entry
127773140 CDS
T08853
Name
(RefSeq) importin subunit beta-1
KO
K14293
importin subunit beta-1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127773140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogl03009
]
127773140
03036 Chromosome and associated proteins [BR:
ogl03036
]
127773140
Ribosome biogenesis [BR:
ogl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
127773140
Pre-60S particles
127773140
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127773140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IMB1
HEAT_EZ
HEAT
IBN_N
HEAT_GCN1
TPR_IPO5
HEAT_MROH2B_C
CEP104-like_TOG
HEAT_GCN1_C_2
TPR_SYO1
PDS5
TPR_DNAAF5
Vac14_Fab1_bd
ARM_TBCD_2nd
GNC1_N
MMS19_N
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
127773140
NCBI-ProteinID:
XP_052155124
UniProt:
I1R8R4
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Position
5:14176807..14181564
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AA seq
868 aa
AA seq
DB search
MNITQILLSAQSADGNLRAVAEGNLKQFQEQNLPNFLLSLSVELSDNEKPPESRRLAGII
LKNSLDAKDSAKKELLIQQWVSLDPSIKQKIKESLLITLGSSVHDARHTSSQVIAKVASI
EIPRREWQELIAKLLGNMTQQGAPAPLKQATLEALGYVCEEISPEHLEQDQVNAVLTAVV
QGMNQTELSPEVRLAAVKALYNALDFAESNFANEMERNYIMKVICDTAVSKEVEIRQAAF
ECLVAIASTYYVHLDPYMQTIFNLTANAVKGDEEAVALQAIEFWSTICDEEIELQEEYEG
SDDANSTVNYRFIEKALPSLVPMLLETLLKQEEDQDQDDNVWNISMSGGTCLGLIARTVG
DAIVPLVMPFVEGNITKPDWHCREAATFAFGSILEGPSVEKLAPLVQAGLDFLLNTTKDP
NSQVRDTTAWTLGRVFELLHSPASANPIITSANLTRIMTVLLESSKDVPNVAEKVCGAIY
FLAQGYEDAESISSVLTPFLPNLIAALLSAADRADTTHFRLRASAYEALNEIVRVSNISE
TSGIIGQLLQEIMRRLNLTFDLHILSSGDKEKQSDLQALLCGVLQVIIQKLSSSDAKSII
AQTADQLMFLFLRVFACHSSTVHEEAMLAIGALAYATGTDFVKYMPEFFKYLEAGLQNYE
EYQVCSISVGVVGDICRALEDKILPFCDGIMTVLLKDLSNSMLNRSVKPPIFSCFGDIAL
AIGDNFEKYLPYAMPMLQGAAELLAVLDHTDEDMVDYGNQLRRGIFEAYSGILQGIKGAK
AQLMIPYASHLLQFTEAVYKDRSRDESVTKAAVAVLGDLADTLGSSSKDLFKSNLFHVEF
LRECHDLDDEVRDTASWAQGMINQALVS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgggcagta
gcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctctccttg
tcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggtattatc
cttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcagcaatgg
gtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataacgctagga
tcttcggtgcatgatgctaggcatacctcatcacaagtcattgccaaggttgcatccatt
gagatcccccggcgtgaatggcaagaactcattgccaaattattgggcaacatgacacaa
cagggtgcacctgctccactaaagcaagcaactctagaggccttagggtatgtctgtgag
gagatttctcctgaacacttggagcaggatcaggtgaatgctgttctaactgctgttgtc
cagggaatgaaccagacagagctaagccctgaagtccgtcttgcagcagttaaagcccta
tataatgctcttgattttgctgagagcaactttgcaaatgaaatggaaaggaattatatc
atgaaggtaatttgtgatactgctgtatcgaaggaagtggagatcaggcaggcagccttt
gaatgccttgttgcaattgcttccacatattatgtacacttggatccttatatgcaaacc
attttcaacctgacagctaatgctgtcaaaggagatgaggaagcagttgcacttcaagct
attgagttctggagcactatttgtgatgaagagattgagctccaagaagaatatgaggga
tctgatgatgctaattctactgtaaattatcgcttcattgagaaggccctcccttcactt
gttccgatgctgctagaaactctgttaaagcaagaggaagatcaagatcaggatgataat
gtatggaacatttccatgagtggtgggacatgccttgggctcattgctagaactgttggt
gatgcgattgtgcctcttgtgatgccttttgttgagggtaacatcacaaaaccagattgg
cattgtcgtgaggcagctacttttgcatttggttctatccttgaaggtccatctgtggag
aaacttgctcccctggtacaggctgggcttgacttcctgctgaacacaacaaaagacccg
aatagtcaggtaagggacaccactgcatggactcttgggagggtatttgagctcctgcat
tctccagccagtgcaaatccaattataacaagcgcaaaccttactcgtatcatgactgtc
ttgctggaaagtagtaaggatgttccaaatgtggctgagaaagtctgtggagccatatat
tttcttgcccaaggttatgaagacgcagagtcgatttcatctgtgcttacaccttttctt
cctaatctcattgctgctctcctttctgcggcggatcgtgctgataccacccacttcagg
cttcgtgcgtcagcttatgaagcattgaatgagattgtgagagtcagcaacatatctgaa
acgtcaggcattataggtcagttactgcaggagatcatgaggagattgaatctgacgttt
gatctccatatactttcatctggtgacaaggaaaagcaaagtgatcttcaggcattactg
tgtggtgtactgcaggtcatcattcagaaattgagcagctcggatgctaagtcaataatt
gcccagactgctgatcagttgatgtttctgtttctgcgtgtttttgcttgccacagctct
actgtacacgaagaagcgatgcttgccatcggtgctcttgcttatgccactggtacagat
tttgtgaaatacatgcctgagtttttcaagtatctggaagctggcttgcagaattatgaa
gagtaccaagtctgttccatctctgttggagtggtgggtgatatttgccgtgccttggaa
gataaaattttgcccttctgtgatgggattatgactgttcttctcaaggacctgtcaaac
tcgatgcttaatcgttctgtgaagcctccgattttctcatgctttggagacattgctctt
gctattggtgataattttgagaaataccttccttatgctatgccaatgcttcaaggagct
gccgaacttcttgctgttttggaccatacagatgaggatatggttgattatggtaaccag
ctcagacggggaatctttgaagcttactctggcatactccagggtataaagggtgcaaaa
gctcagttgatgataccctatgcaagccatctattgcagttcactgaagctgtctacaag
gaccgcagcagggatgagagcgtgacaaaggctgcagttgctgtcctgggggatcttgcg
gacacactcggctcaagctcaaaggatctgttcaaaagcaacctcttccatgttgagttc
ctgagggagtgccacgatttggatgatgaagttagggacaccgcgtcatgggcccaggga
atgataaaccaagcactggtttcttaa
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