KEGG   Oryza glaberrima (African rice): 127773342
Entry
127773342         CDS       T08853                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein 10, chloroplastic
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
ogl  Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ogl03016]
    127773342
   03029 Mitochondrial biogenesis [BR:ogl03029]
    127773342
Transfer RNA biogenesis [BR:ogl03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    127773342
Mitochondrial biogenesis [BR:ogl03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    127773342
SSDB
Motif
Pfam: PPR_2 PPR PPR_1 PPR_3 TPR_24 PPR_long TPR_12 TPR_19 TPR_16 Mtf2 Exog_C TPR_25 ENCP4 DUF4256 DUF892
Other DBs
NCBI-GeneID: 127773342
NCBI-ProteinID: XP_052155366
UniProt: I1PTZ2
LinkDB
Position
5:complement(9500200..9506534)
AA seq 793 aa
MDATGRGVFPNKPALPAGPKKRPPTHTVLLPATPPPRPSRSSLPLDSLLLHLTAAPPPPQ
PPATRRPHPTPTPPHSFLSPAAQSLVAAISSQPLPSLPAFLSSRRDELLRSDLPSLLKAL
ELSGHWEWALALLRWASDEGAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDV
RAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLE
EMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAG
NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN
TVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRS
GCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYA
FKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQC
YAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGIEKAFQEVKAQGYKPD
LVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK
QLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLE
MFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQKLQH
MLEARIKDAQFGR
NT seq 2382 nt   +upstreamnt  +downstreamnt
atggacgccaccggccgcggggttttccccaacaagcccgccctccctgccggccccaag
aagcgcccccctacgcacacggtgctcctgccggccacgccgccgccgcggccgtcgcgc
tcctcgctcccgctcgactcgcttctcctccacctcaccgcggccccgccgccgccgcag
ccgcccgccacgcgccggccgcaccccaccccgaccccgccgcactccttcctctccccc
gccgcgcagtccctcgtggccgctatctcctcgcagccgctcccctcgctcccggctttc
ctctcctcccgccgtgacgagctgctgcgctctgacctcccctccctcctcaaggcgctc
gagctctccggccactgggagtgggctctcgcgctcctccgctgggccagcgacgagggc
gccgccgatgccgctgcgctcgagatggtcgtccgcgcgctcggccgcgagggccagcac
gacgtcgtctgcgacctgctcgacgaaatgccgctcccgcccggatcacgcctggacgtc
cgcgcctacaccacggtgcttcacgcgctctcccgcgcgggccggtacgagcgcgcgctc
cagctgttcgccgagctccggcgccagggggtggtgcccacgatcgtcacctacaacgtc
gtgctcgacgtgtacggccggatggggcgctcgtggccgcgtatcgtcgctctactggag
gagatgcgtgccgccggcgtcgagcccgacgacttcactgccagcacagtgatcgcggca
tgcggccgtgatggcctccttgatcaggcggtcgccttctttgaggacctcaaggcccgt
ggccacgtcccgtgcgttgtcacatacaatgcactcctgcaagtgtttggcaaggccggg
aactacactgaggcgctgcgggtgctcaaggaaatggaggatagtggctgccagccagat
gccgtcacatacaatgagctcgccgggacatatgccagggctgggttctttgaggaggct
gccaagtgccttgacacaatgaccagcaagggattattgcctaacacattcacgtacaat
actgtcatgacggcatacgcgaatgtcggtagggtggatgaagcactagctctgtttgat
cgaatgaagaagaatgggtatgttccgaatgtgaacacctacaatcttatctttggtatg
ctggggaagaaatcaaggttcaccgcgatgctggagatgcttgaggagatgtcaaggagt
ggatgcacaccgaatcgggtcacctggaacacgatgttggccgtctgtgggaagcggggt
atggaggactatgtcaccagggtactcaacgggatgaaatcttgtggggttgagctgagc
cgagatacctacaacacactgatatctgcctatggtcgatgtggttcgaggacctatgct
tttaagatgtatgatgaaatgatcagttctggcttcaccccttgcctcaccacatacaat
gctttgctgaatgtgctgtcaagacaaggtgattggtccactgctcagtccatagtaagc
aaaatgctgaagaatggtttcaagccgaatgatcagtcatattcactactgctccagtgc
tatgcaaagggtggcaatgcagctgggatagagtctatcgagaaagaagtttatgtcggt
acaatttttcctagttgggttatcttgcggacacttgtgatcgcaaacttcaagtgccgt
agattagaagggattgagaaggcatttcaagaggtaaaggcacagggttacaagcctgat
cttgtcatattcaactccatgcttgcaatgtatgcaaagaatggattatatagcaaggcc
acagagatgttcgattcaataaagcagagtgggctgagccctgatctaatcacttacaac
agcttaatggacatgtatgccaagtccaatgagtcttgggaagctgagaaaatacttaaa
cagctcaaaagttctcaggtgaagcctgacgttgtgtcatataacaccgtcataaacgga
ttctgcaagcaaggtctgatcaaagaagctcagaggatcctatctgagatgattgctgat
ggcatggctccatgtgttgtaacttatcacacactagttggaggatacgccagcctggag
atgtttaatgaggcaagagaggttgtcaactacatgattcaccacaacttgaagcctatg
gagctgacatacaggagagtagtcgacagttactgcaaagccaagcggtatgatgaggcc
cgtgagttcctgtctgaaatttcagatactgaccaaaattttgatcagaagttgcagcac
atgcttgaagcccgtataaaggatgctcaatttggaagataa

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