Oryza glaberrima (African rice): 127773358
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Entry
127773358 CDS
T08853
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogl01009
]
127773358
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127773358
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
127773358
Protein phosphatases and associated proteins [BR:
ogl01009
]
HAD phosphatases
Fcp/Scp phosphatases
127773358
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127773358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
127773358
NCBI-ProteinID:
XP_052155382
UniProt:
I1PS83
LinkDB
All DBs
Position
5:complement(1736508..1740955)
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AA seq
726 aa
AA seq
DB search
MGPTTATDAGARMKPTTVASAVHRVQMALYDGAAASREPLLRAAASLLSGPDYADVVTER
SIADACGYPACPNPLPSEDARGKAAPRFRISLREHRVYDLEEARKFCSERCLVASAAFGA
SLPPDRPFGVSPDRLDALVALFEGGGGGGGDGGLALGFGASGDGKEVEEGRKVEIMEKEA
AGTGEVTLQEWIGPSDAIEGYVPRRDRVVGGPKKEAKQNDACSAEQSSNINVDSRNASSG
ESGMVLTENTKAKKKEATKTPLKMFKQDEDNDMLSSCISDSIAKQLEDVVLEEKKDKKKN
KAAKGTSRVGKSKPAKRPVGRDGHEVDFTSTIIMGDHGSEMMDHGALGQYNFSSSILANE
QPSSSQYAAIGSVQAYTEELDELFSNAVNIAKDETSDDSGRCTLRSSLKAVGSKNARRSV
KWADENGSVLETSRAFVSHSSKSQESMDSSVRRESAEACAAALIEAAEAISSGTSEVEDA
VSKAGIIILPDMVNQQQYNNDYDNDKDAGENEIFEIDRGVVKWPKKTVLLDTDMFDVDDS
WHDTPPEGFSLTLSSFATMWAALFGWVSRSSLAYVYGLDESSMEDLLIAGGRECPQKRVL
NDGHSSEIRRALDTCVCNALPVLVSNLRMQIPVSKLEITLGYLLDTMSFVDALPSLRSRQ
WQLMVLVLLDALSLHRLPALAPIMSDSKLLQKLLNSAQVSREEYDSMIDLLLPFGRSTQS
QASLPS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgggccccaccacggccaccgacgccggcgcgaggatgaagcccacgaccgtcgcgtcg
gcggtgcaccgcgtccagatggcgctctacgacggcgccgcggcgtcgagggagccgctg
ctccgcgcggcggcctcgctgctctcggggccggactacgccgacgtcgtcacggagcgc
tccatcgccgacgcctgcgggtacccggcgtgccccaacccgctcccctcggaggacgcc
cgcggcaaggcggcgccgcggttccgcatctcgctccgggagcaccgcgtgtacgacctc
gaggaggcccgcaagttctgctccgagcgctgcctcgtcgcctccgccgccttcggggcg
tcgctcccgcccgaccgccccttcggcgtctcgcccgaccggctcgacgccctcgtcgcg
ctcttcgagggcggcggtggtggtggtggtgacggtgggttggcgctagggtttggggcg
agcggcgatgggaaggaggtggaagaggggaggaaggtggagatcatggagaaggaggcg
gctgggacgggggaggtgacgctgcaggagtggattgggccgtcggacgccatcgagggc
tatgtgcctcgccgtgatcgcgtcgttggagggccaaaaaaagaggctaaacagaacgat
gcttgtagtgctgagcagtccagtaatattaatgtggattctaggaatgcttcttctggt
gaatccggcatggttcttactgagaatacaaaagcaaagaaaaaggaagcaaccaaaacc
ccattgaagatgttcaagcaggatgaagataatgatatgttgtcgtcttgcatatcggat
tccattgcgaagcagctggaggatgtagttctcgaagagaaaaaggataagaagaaaaat
aaagcagctaaaggaacatcgagggtaggtaagagtaagcctgcaaaaagaccagttggg
cgtgatggacatgaagtggactttacaagtacaattattatgggtgatcatggttcagaa
atgatggatcatggtgctctgggtcaatataatttctcaagttctatattagcaaatgag
cagccttcatcatctcagtatgcagcgataggttcagtgcaagcttacactgaagaacta
gatgaattatttagtaatgcagttaacattgcaaaagacgagacaagtgatgatagtggt
agatgtacactaagatcttcattgaaggctgttggatccaagaatgcaaggcgttctgtg
aaatgggcagatgagaatggaagtgtgctagagacaagcagagcatttgtaagtcactcc
agtaaatctcaagaaagcatggacagttcagtaaggcgtgaatctgcagaagcttgtgca
gctgcgcttattgaagcagcagaagctatttcatctggcacatcggaagtagaagatgca
gtttcaaaggcaggaatcatcatactgccggacatggttaaccagcaacagtacaataat
gattatgacaatgacaaagatgcaggggaaaatgaaatatttgaaattgataggggtgtt
gtgaagtggccgaagaagactgtgcttctagacacagatatgtttgatgtcgatgattct
tggcatgatacaccaccagaaggctttagtctaactctgtcctccttcgcaacgatgtgg
gctgcattatttggatgggtatcccggtcctcattggcctatgtgtatgggcttgatgaa
agttctatggaagatttgttgattgcaggtggaagagaatgtcctcagaagagagtttta
aatgatggccactcatctgaaattagaagagctttggatacttgtgtgtgtaatgccctg
ccagttcttgtatcaaacttgaggatgcaaattccagtctcaaagttggagattactctg
ggatacttgttggacacgatgtcatttgttgatgcactgccttctctgagatcaaggcag
tggcaattgatggttctcgtgctgcttgatgcgctctcactccatcggcttcctgctctt
gctccaataatgtcagattcgaagcttttgcagaagcttttgaactcggctcaggttagc
cgagaggagtatgactccatgattgatctcctcctcccttttggaagatccacgcagagc
caggcatccctgccaagttaa
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