Oryza glaberrima (African rice): 127773476
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Entry
127773476 CDS
T08853
Name
(RefSeq) PWWP domain-containing protein 1-like isoform X1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00270
Cysteine and methionine metabolism
ogl01100
Metabolic pathways
ogl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
127773476
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127773476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127773476
03032 DNA replication proteins [BR:
ogl03032
]
127773476
03036 Chromosome and associated proteins [BR:
ogl03036
]
127773476
Enzymes [BR:
ogl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
127773476
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
127773476
DNA replication proteins [BR:
ogl03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
127773476
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127773476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
Motif
Other DBs
NCBI-GeneID:
127773476
NCBI-ProteinID:
XP_052155503
LinkDB
All DBs
Position
5:2415473..2423183
Genome browser
AA seq
1095 aa
AA seq
DB search
MPPIPSRSGPKLPKSPIPKSPKPKPKSRDPATKSRVSPPLRRMSDPAPAAAASTATATAA
AGSGAIVHPGGGGAWPRGVRFGDMVWGKVKSHPWWPGHVYSITLTSDGEVRRGYRDGLVL
VAFFGDSSYGWFEPHELLPFEEHFREKFAQPGGRNFPTAIDEAADEVARRAALAFLCPCH
RPNAARPHELDPRYLLVDVPGFDTDAEYHPEQVAAEREKIDPRALLDYLKGAAVEQLDAA
ELIGKPKRHIPAVQMSSMLEAYRLSRYALKDPTYAQAFGMDYDEAQAAKTALEKKAREGK
RRVWWDRKTQEEPQDDQGESSNTTPAGRPAKGRKKAAENPGGRRRKGSAASTAARLMEKI
MPSAAAMKPRAKKKDQYLLKRRDDARAPPPPSMPDAFPAAPMAPALDDVPPGFPSDPPTP
PLPSSTLAADEEFLLQRRTPPPLLSAPPTPLALPPAAAGQVGDGGAPTDAATAAAAAAAP
KKATKPKKAAARKREREEPADAAAAAAAGGVAGEPKKKKKKKLAELNGVAVAAAGKPGLL
PAKVDHDLKQVISELQSLPLVASYVAGRRSISDEARSFLLAFRSKSFKKSHENDPPEDNK
ASKPNAATAADGQKPPAKKKPAARPGDTTAASAKVAGVKRAPSDRQEELATKKKAKLNKI
KTLATDKKAAGLELAAAAPAAARKNDAIAARKKEKEPALAPAIKTPSPTALMMKFPPKTT
LPSVASLKARFARFGPLDVDGIRVYWKSHMCRVIYRFKSDADVALKYARANTTMFGQVAP
NYYLRGVESDGDLAADAAPPPPQQRSELRLMETAPFRPGTSGGNGAPLPLSRAVPARAVV
GQQPKSILKKTVTDDGAPSPAALRDAPRVKFMLDAGDSKLEPPPPAAPASGGGDAAAPLA
KSATKSVGFAPPPLQPPARPAQHPHLQPPARPAQQPPRPPVTQPLPPPPPLHQHQPYQPR
HTDALPLPLPPPPPPPFSVQQQQLPPPPPYHLRHSIDGMHHQLPGPPLPPSYQHRAAAGV
VFPGQHQQQPYRPNNDTQLGLPGAGAAAGDVTPAWKRGGREFDEELMRVMRGIAKMVEPL
TDKNGNFPYHLFTSA
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgatcccctcccgttcggggcccaagctcccgaaatcccccatccccaaaagt
cccaaacccaagcccaaatcgagagaccccgcaaccaaatctagggtttcgcctcctctc
cgcaggatgtccgatcccgcccccgccgccgccgcctccaccgccacggccacggccgcc
gccggctccggcgccatcgtgcaccccggaggcggcggcgcgtggccgcgcggcgtccgg
ttcggcgacatggtctggggcaaggtcaagtcccacccgtggtggcccggccacgtctac
agcatcaccctcaccagcgacggggaggttcgccggggctaccgcgacggcctcgtcctc
gtcgccttcttcggcgactcgagctacggctggttcgagccgcacgagctcctccccttc
gaggagcacttccgggagaagttcgcccagccgggtggccgcaacttccccaccgccatc
gacgaggccgccgacgaggtcgcccgccgcgccgccctcgcgttcctctgcccctgccac
cgccccaacgccgctcgcccccacgagctcgacccgaggtacctcctcgtcgacgtgcct
ggattcgacaccgacgccgagtaccaccccgagcaggttgccgcggagcgggagaagatc
gatccgcgggcgctgctggactacctgaagggcgccgccgtggagcagctggacgccgcc
gagctgatcggcaagcccaagcggcacatcccggcggtccagatgagctccatgcttgag
gcctaccgcctatccagatacgcgctgaaggatcccacctacgcccaagctttcgggatg
gactacgacgaggcgcaagcggcgaaaacagcgttggagaagaaagctcgagaaggcaag
agacgtgtttggtgggaccggaaaacacaggaggaaccccaggatgatcagggcgagtct
tcaaatacaactcctgcaggtcgtccggcgaagggccgcaagaaggcggcggagaatccc
ggcggccgccgccggaagggcagcgcggccagcacggcggcgaggctcatggagaagatc
atgcccagcgcggcggcgatgaagcccagggccaagaagaaggaccagtacctgctcaag
cgccgcgacgacgcgcgcgccccgccgccgccgtccatgccggacgccttcccggcggcg
cccatggcccccgctctcgacgacgtcccgccggggttcccttccgatcccccgacgccg
ccgctccccagcagcaccctcgccgccgacgaggagttcttgctgcagaggcgcactcca
ccgccgctgctgtccgcgccacccaccccgctcgcgcttcctcccgccgccgccgggcag
gtcggcgacggcggcgcgcccacggacgccgccaccgccgccgccgccgccgcggcgccg
aagaaggcgaccaagccgaagaaggcagccgcccgcaagcgcgagcgcgaggaacccgct
gacgccgccgccgctgccgccgcaggcggcgttgccggcgagcctaagaagaagaaaaag
aagaagctcgccgagctcaacggcgtggcggtcgccgccgccggcaagccggggttattg
cctgctaaggtagaccatgatctgaagcaggtaatatccgagcttcaaagccttcctctc
gttgcctcctatgtcgccggccgccgcagcatctctgacgaagctcgctccttcctcctc
gccttccgctccaagtctttcaagaagagccatgagaacgatccacccgaggacaacaag
gcctctaagcccaatgccgccaccgccgccgacggccagaagccgccggcgaagaagaag
ccggccgcgaggcccggcgacaccaccgccgcctccgccaaggttgccggcgtcaagcgc
gccccgtctgatcgccaggaggagcttgccaccaagaagaaagccaagctcaacaagatc
aagacgctcgccactgacaagaaggccgccggtctggagctcgccgccgcggcgcctgcg
gcggcgaggaagaatgatgcgatcgctgccaggaagaaggagaaggagccggctctggct
ccggcgatcaagacgccatcgccgacggcgctgatgatgaagttcccgccgaagaccacg
ctgccatcggtggcctccctcaaggcgaggttcgcgcggttcgggccgctcgacgtcgac
ggcatccgcgtctactggaagtcccacatgtgccgcgtcatctacaggttcaagtccgac
gccgacgtcgcgctcaagtacgcgcgcgccaacaccaccatgttcggccaggtcgcgccc
aactactacctccgcggcgtcgagtcggacggcgacctcgccgccgacgctgcacctccg
cctccgcagcagcgctccgagcttcgcctcatggagacggccccgttcaggcccgggacc
tccggcggcaacggcgcgccgctgccgctgtccagggccgtgccggcgcgcgcggtggtt
gggcagcagcccaagtcgatcctcaagaagacggtcaccgacgacggcgcgccgtcgccg
gcggcgctccgtgatgccccgcgggtgaagttcatgctcgacgccggggacagcaagctc
gagccgccgccacctgcagcgccggcgagcggcggcggagacgccgccgcgccgctcgcc
aagagcgccaccaagtcggtcgggttcgcgccaccgcctctccagccgccggcgcgcccg
gcacagcacccccacctgcagccgccggcgcgtccagcgcagcagcctcctcgcccgccg
gtgacccagccactccctccgccgccgcctctccatcagcaccagccataccaacctcgc
cacaccgacgcgctgccgctgccgctgccgccgccaccgccgccgccattctccgtgcag
cagcagcagctccctccaccgccaccataccacctccgccacagcatcgacggcatgcac
caccagctccccggaccaccgctgccgccgtcgtaccagcatcgcgccgccgccggcgtc
gtcttccccggacagcatcagcagcagccataccgccccaacaacgacacccagctcggc
ctccccggcgccggcgccgccgccggtgacgtcacgccggcgtggaagagaggagggaga
gagttcgacgaggagttgatgagggtgatgcggggaatcgccaagatggtggagccattg
acggacaagaacggcaacttcccctaccacctcttcacctcagcttga
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