Oryza glaberrima (African rice): 127773610
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Entry
127773610 CDS
T08853
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127773610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127773610
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127773610
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
HECT type E3
127773610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Ribosomal_L10
IQ
Motif
Other DBs
NCBI-GeneID:
127773610
NCBI-ProteinID:
XP_052155698
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All DBs
Position
5:2969524..2982140
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AA seq
1030 aa
AA seq
DB search
MFFSGDPTARKRVDLGGRSSKERDRQVLLEQTREERRRRLGLRLQNSSATKIQKCFRGKR
DLELARSEVRGNFCSTFGEHCQRVDWSSFGANSDFLRQFLFFFNAKKDSDIAILCQVCNL
LLDYVKRGGDVLRLFGGTNYSSLEPLVIHRVKKLALICVQTVHQKRHDWGSQLLMPPEST
PKPCGSLLKTVACLINPKLAWNCKVVGYLQRKKIYCLFRGIIISIPQTARNLEHNNNTSA
LEQVLMLIASHIGDDPCCCPVVDPRWSFSSQLLSVPFLWHRLSHFKKVFSANGLSKYYIH
QIACFLPSCADVLPNDISSNHPGYACVLANVLEAATWILSEPKFASETAADIIAVCTSLL
DELPTITSPTGRADDDDDTPMDDVINGLDADLEKQITAAIDSRLLQHLVNALFRGTISTD
YSYPTGPSDIEVEAVGSICAFLHVTFNTLPAERIMTGLAYRTEIVPALWNFIKRCNENQS
WPQFSKFVSSPPADAVGWLLPVSVFCPIYKHMLKIIDNGEFYEQEKPLSLKDLKSLVLIL
KKALWELLWVIPSHASPAKKVLPNPSGFKKLSIENVKIGARIGLSELLAQLQDWNNRLPF
TSSNDFYSQQATSENFVSQALLGNTRASEIIKLAPFLAPFTSRVKIFTSQLANSRQLTTS
HSALTRHRFKIRRNRLLEDAFDQLSMLSEEDLKGPIRVVFVNEHGVEEAGIDGGGIFKDF
MENITRAAFDVQYGLFKETADHLLYPNPGSGLVHEQHLQYFHFLGSLLGKAIYEGILVDL
PFATFFLSKLKHKYNFLNDLPSLDPELYRHLLSLKHYDGDISQLELYFVIVNNEYGEQSE
EELLPGGRDMRVTSENVITYIHLVANHRLNYQIRAQSTHFLRGFQQLIPNEWINMFNEHE
FQVLISGSLESLDIDDLRSNTNYSGGYHPDHELIDIFWEVLKSFSSHNQKKFLKFVTGCS
RGPLLGFQYLEPKFCIQRAGVPGMEEEDEDRLPTSATCMNLLKLPPYRNKTQLESKLLYA
INAEAGFDLS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctccggtgacccgacggcgaggaagcgggtggacctcggcgggcggagcagc
aaggagcgggaccggcaggtgctgctcgagcagacgcgggaggagcggcggcggcggctg
ggcctgcgcctgcagaacagctccgccacgaagatccagaaatgcttcagagggaagaga
gatttggaattggcacgttcggaagttcgagggaacttttgctctacttttggggagcac
tgccagagggttgattggagcagtttcggtgctaattctgatttccttcgtcaattcctg
ttcttcttcaatgcaaagaaagacagtgatattgctatactctgtcaagtctgcaatttg
ctgttagattatgtcaaacgtggtggagatgttctaagactctttggtggtacaaattac
tcctcactggaacctcttgtgattcacagggttaaaaaacttgcactcatttgtgtgcaa
actgtacatcagaaaaggcatgattggggcagtcagcttttgatgccgccagaaagcaca
ccaaagccttgtggttcattactcaaaactgttgcttgcttgataaatcctaagcttgca
tggaactgcaaggtagttgggtatcttcagcggaagaagatctattgcttatttaggggg
attattatatccataccgcaaactgcaagaaatttggagcataataacaatacatctgct
ctggagcaagttcttatgcttattgcttcacatattggcgatgatccgtgttgttgtcca
gtagtggatccaagatggagtttctcctctcagcttctatcggttcctttcctctggcat
cgtttatcacacttcaagaaggttttctcagctaatggactcagcaaatattatatccat
cagatagcttgctttttgcctagctgcgctgatgttcttccaaatgatatatcatctaat
catccaggttatgcatgtgttcttgcaaatgttcttgaagctgcaacctggattttgtcc
gagccaaagtttgcttctgaaacagcggctgacatcattgcagtctgtacatcactgctg
gacgagttgccaaccattacatcacctaccggaagggcagatgacgacgatgacacaccc
atggatgatgtcattaatggtcttgatgctgatttggaaaaacaaattactgcagcaatt
gattcaaggttgcttcaacatttggtgaatgctctgttcagaggcacaataagtacagac
tattcttatccaactggaccgtcagatattgaggtggaagctgtaggatctatatgtgct
tttcttcatgtcacattcaacacattgcctgcagagcggattatgactggcctggcctac
cggactgaaatagttcctgcactatggaacttcataaagcgatgtaatgagaaccaaagc
tggccacaattttccaagtttgtctcttctccgcctgcagatgccgtgggttggctccta
cctgtatctgtattctgtcccatatacaaacacatgttgaagataattgataacggggaa
ttctatgaacaagagaaacctttgtcacttaaagatttgaagtccttggttttaattcta
aagaaggctttatgggaacttctatgggttattccttcacatgcctctcctgctaagaaa
gtgctacccaacccttctggatttaagaagttgtcaattgagaatgtcaagattggggca
aggattgggttatctgaactactcgcacagttgcaagactggaataacaggctcccattt
acttcttccaatgatttctattcacaacaagcaactagtgaaaattttgtctctcaggct
cttcttggcaatactcgagcatctgaaattataaagctggctccctttttagcacctttt
accagcagagttaaaatattcacttcacaattggcaaattctagacaattgacaacatcc
cattctgctttgacaagacaccggttcaaaataagaagaaatcgacttctggaagacgct
tttgatcagctaagcatgctttctgaagaagaccttaaaggaccaattcgagtggtgttt
gttaatgagcatggtgttgaagaggctgggattgacggaggtggaattttcaaggatttc
atggaaaatatcactcgagccgcttttgatgtgcagtacggtttattcaaggagacagcc
gatcatcttctctacccaaatcctggatctggattggtccatgaacagcatctgcaatac
ttccattttcttggcagtctccttgggaaggcaatctatgagggcatacttgttgatctg
ccatttgcaacattcttcttgagtaaactaaaacacaagtacaacttcttaaatgatctg
ccttcattggatccagaattgtatcgtcatcttctgtctttaaagcattatgatggtgat
atctcgcaattggagttatactttgttattgtgaataacgaatatggtgaacaatctgaa
gaagaactgctcccaggtgggagagatatgcgtgtaactagtgaaaatgttattacttat
atccatcttgtcgccaaccatcggttgaactatcagatccgcgcccaaagcacacatttt
ttgagaggctttcaacaactaataccgaatgaatggattaacatgttcaatgaacatgaa
ttccaggttctcatatctggctctctagaaagcttggacatcgatgacttgcgctcgaac
actaactattctggaggatatcatccggaccatgagcttattgatatattctgggaggtc
ctaaagagcttcagttcgcataatcagaaaaagtttctcaagttcgtgaccggatgttct
cgtggaccactccttggatttcagtacctcgaaccaaaattctgcattcagagggctggt
gttcctggcatggaggaggaggacgaagaccgcttgcctacatcggccacttgcatgaac
ctcctgaagctccctccttatagaaacaagacgcaattggaaagcaaattgttgtacgcg
ataaatgcagaagctggttttgatctaagttaa
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