Oryza glaberrima (African rice): 127773732
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Entry
127773732 CDS
T08853
Name
(RefSeq) FHA domain-containing protein DDL isoform X1
KO
K13108
smad nuclear-interacting protein 1
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127773732
Spliceosome [BR:
ogl03041
]
Complex B
Other components
RES complex
127773732
Complex C
127773732
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Gene cluster
GFIT
Motif
Pfam:
FHA
Motif
Other DBs
NCBI-GeneID:
127773732
NCBI-ProteinID:
XP_052155858
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All DBs
Position
5:23808472..23814254
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AA seq
488 aa
AA seq
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MASAVERREHSRRSGRSRSRSPVRDRGSPPRRRSPPARRERSPAPRSRSPRRRSPVKTTS
SHRERSPVRRNGSPRRSPVRSIGRSPQRYRVKEQVRSPKQAQSRSQSPSPARKRESRSPS
PRSKRLRRAQSEREGADATEGDRRKTTSREERDSGRYRERDEGKDVSRDRKTEREDSRGS
FKDRKLDRDDDRDHSRDRRSDRSGASRETWSSRDDERRDSRGRRSDGDDRKVNSREQRAD
HDDRRDSARERRADRDESNGESGRSSRRGRSVSPEEHRHRGRHESRQSPRSSRSAAHGED
TSSVTDAASRSVDHDSLVKMNATAEALEAKEKQKPSFELSGKLAEETNRVAGVNLLHSEP
PEARKSDIRWRLYVFKGGEPLEEPLYVHRMSSYLFGRERKVADIPTDHPSCSKQHAVLQY
RLVEKEQPDGMMSKQVRPYLMDLGSTNGTFINENRIEPSRYYELFEKDTIKFGNSSREYV
LLHENSKD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggcggtggagcggagggagcattcgcggaggtcggggcgctcgaggtcgcgc
tcgccggtgagggaccgtggctcgccgccgcgcaggcggagcccgcctgctcggagggag
aggtcaccggctccgaggagtcgctcgcctaggaggaggtctcctgttaagactactagc
tcacatagggagaggtcgcctgttcggaggaatggctcacctaggaggtctcctgttagg
agtattgggaggtcgccacagagatatagggtgaaggagcaggtcaggtcgccgaaacaa
gctcagtcacggtcacagtctccgtcacctgccaggaaacgggagtctcggtcgccctcg
ccgcggagcaaacgattgagaagggctcagagtgagcgggaaggtgcagatgctactgag
ggtgaccgtcggaagaccaccagcagggaagagcgggactcggggaggtacagggagcgt
gatgagggaaaggatgtgtcaagggatagaaagactgagagggaggatagtaggggctct
tttaaggacaggaaactggatcgtgatgatgatagggatcactcaagagatagaaggtct
gatcggtcgggtgcttcaagggagacatggtcaagccgagatgatgaaaggcgtgattca
aggggtagaaggtctgatggggatgatcgaaaagtcaattccagggagcaaagggcggat
catgatgatagaagggattctgcaagagagagaagggcagaccgggatgagagcaatggt
gaatctgggagatcatctaggcgtgggcgatcagtgtctccagaagagcataggcatagg
ggtagacatgaatcccgccagtcaccgaggtcatctagaagtgcagcacatggtgaggat
acaagctctgtaacagatgcagcgtcacggagtgttgatcatgattctttggtgaagatg
aatgctactgcagaagctctggaagcaaaagaaaagcaaaaaccatcatttgaattgtct
ggaaagcttgctgaggagactaacagagttgcaggtgtaaatctgttgcattcagaacct
ccagaggctcgcaagtcagatattagatggagactctacgtcttcaagggtggtgaacca
ctcgaagaaccattatatgttcaccggatgagcagctacctttttggaagggaacggaaa
gttgcagacatccccacagatcatccctcctgcagtaagcaacatgcagttcttcaatat
agacttgtagagaaggagcagccagatggcatgatgtcaaagcaagtgaggccttatctg
atggatcttggtagtaccaatggaactttcattaatgagaatcgtattgagcccagccgt
tattatgaactctttgaaaaggataccattaagtttggcaatagtagccgggagtatgtt
ttgcttcatgaaaactcgaaagattga
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