Oryza glaberrima (African rice): 127773764
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Entry
127773764 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127773764
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127773764
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogl01002
]
127773764
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127773764
03036 Chromosome and associated proteins [BR:
ogl03036
]
127773764
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127773764
Peptidases and inhibitors [BR:
ogl01002
]
Metallo peptidases
Family M67
127773764
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127773764
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
127773764
BRISC complex
127773764
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
127773764
DNA repair and recombination proteins [BR:
ogl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
127773764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
127773764
NCBI-ProteinID:
XP_052155897
UniProt:
I1PXJ8
LinkDB
All DBs
Position
5:23677797..23683744
Genome browser
AA seq
420 aa
AA seq
DB search
MSLTEVRIGEEVWLTCLSHALTTETEEVMGLLFGDIKHSSRGGVTALIWGASPQMRCERK
KDRVEVNPELLAAATAQAESLSATIGEKTRVIGWYHSHPHITVLPSHVDVRTQAMFQLME
PGFVGLIFSCFSEDAQKVGKIQVIAFQSLGGNQQSVVPVNDPVINLESSWSSLDDTSHPA
LIEGIEQDTGDSKSSRNSKVWAKSSDVDFYPHSDANHSAKHQSKENAIVAYDPNNAPETP
VDLDESDMTPSIQEALHRSNMDISGAEYVRKEVPLYVFPTRHLLKLDTTLTSYCDMQHVV
FEEEKSAYNQAMHQNIRDGKIHPLTSIHHASTYNSSLCKLMEYCLSPAINVLQDRLKENE
LRLSMLMEEAKQLEAENQSMRNDSPRRLMYHGTSGTSSLMAQDKQMSPRSPSGTGRRKAS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgacggaggtcaggatcggggaggaggtgtggctcacctgcctctcccacgcc
ctcaccaccgagacggaggaggtcatgggcctcctcttcggcgacatcaagcattcgagc
aggggcggggtgactgctctgatatggggggcgtcgccgcagatgaggtgcgagcggaag
aaggacagggtggaggtcaacccggagctgctcgcggcggcgacggcgcaggccgagagc
ttgtcggccaccatcggcgagaaaacgagggtgattggatggtaccactcgcacccgcat
atcaccgttctgccttcccatgtagatgttcggacccaggcaatgtttcagttgatggag
ccaggttttgtgggtctgatattctcttgttttagcgaagatgctcaaaaggttggaaaa
atccaagtgattgcttttcagtcacttggtggaaatcagcaatctgttgttcctgttaat
gatccagtcattaaccttgaatcatcttggagttcgttggatgatacctcacatccggca
ttgattgaaggcattgaacaagacacaggggattctaaatcttcaagaaatagcaaggtg
tgggcaaaatcttctgatgtggatttctatcctcattctgacgccaatcactcagcaaaa
catcaatccaaagaaaatgctatagttgcatacgatcccaataatgcacctgagacccct
gttgatctagatgaatcagatatgaccccaagcatccaggaggcgttgcacaggtcaaac
atggacattagtggtgcagaatatgtaagaaaggaggtgccactttatgtatttccgacc
aggcatctgctaaagctggacaccacattaacttcttactgtgatatgcaacatgtcgtt
ttcgaagaggaaaaatcagcatataatcaagccatgcatcaaaatattcgtgatgggaag
atccacccacttacatctattcaccatgcatctacatacaactcatctctctgcaaatta
atggaatattgtttgagccctgctataaatgtacttcaggatcgtctgaaggaaaatgaa
cttcggttatctatgctaatggaggaggctaaacaacttgaggcagagaaccagagcatg
agaaatgattctcctcgtcgcttgatgtatcatgggactagtggcaccagttctctgatg
gcacaggataagcaaatgagccccagaagtcctagcggcaccggccggagaaaggcttcc
tga
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