Oryza glaberrima (African rice): 127773770
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Entry
127773770 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127773770
KO
K17925
sorting nexin-13
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogl04990
]
127773770
Domain-containing proteins not elsewhere classified [BR:
ogl04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
127773770
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
127773770
NCBI-ProteinID:
XP_052155904
UniProt:
I1PYC4
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Position
5:25569805..25577783
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AA seq
1136 aa
AA seq
DB search
MATAGGPGRAHTVRDLAEEGKKRAVLLLVFAFGLAFLMSLTSSSVWINLPFATALIVLFR
YISLDYDFRRKSTTTTDNDASRALTKTKSIEPNKIPSIQKDGKSDWKSKVNSPPVEAAIE
QFTRHLVTEWVTDLWYSRVTPDKEGPEELINIVNNVLGEISVRARNVNLIALLTRDLIDL
ICKNLELYHLCQAKIGKEKFVNLSTERRDAELKLTLITENKLHPALFSASAEHKILQSLA
DGLISVTAKPQDLQCYFFRCTARELLACAVMRPVVNLANPRFINERIELLALSHANKAER
GVAESLEHATMVKQREPPMPTVDELAALIDPTSSGVELVRFSQDQSKAAPDTQLSNTRHP
SNLKPNSSSTSLTNSSHPLESSILSSTTHGHSNSSMSLHSQSSGRTTAECYEGEWAQTMD
ISSQRKSQALAPEHLENMWTKGKNYKSENVKHVARVPSKSSSLGTSPVQQSAPYSTSVGH
YPSAPQRQTTMSRSDDQHLIKHSTTAAYLNGTNHLRMALSRESADHASQEDFGVDSESSY
ATEEDENNNVTGLDSPVTRVWDSKSKGNATSSHIHHPLESPGFHKAKKNRSHIGKLKMTK
TSGRKRSRSNSQKPPVWLEVERSSLLMGDDLDILNTSADDSRTDGLYDDTEVESMSRMFS
GANASSLSLASTDSSYSSNYSTTNVLEDSYLKLKCEVVGASIVKSGSGMFAVYSVSVTDA
NGNSWSIKRRFRHFEELHRRLKEYSQYNLHLPPKHFLSSGLEVPVVRERCKLLDIYLKKL
LQIPTVSSCIEVWDFLSVDSQTYIFTDTLSVIQTLSVNLDERSKEKNTKSFNSSQALNGN
LVSASQSLHVHKDDTMPKEKDKDFDAVDGLRSRKRNTEQNLGIGVGNTNANLHEDLSGSD
PEQNEHSFIINSGNSKKTLSSETDYPPQSLESDGYSVAPNDWMAPNLSVPLFHLVDVVFQ
LQDGGWIRRQAFWIVKQILQLGMGDTFDDWLVEKIQLLRKGRIVAFAVKRVEQILWPDGI
FLTKHPKRKAATPPPGSQSNGMANYLTDEQRLEDAHRANFVHELMIEKAPSALVSLVGRK
EYERCAQDVYFFLQSPVCLKQLAFEVLELLVLAAFPELDDIVKKWHEDKQQLYVLE
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcaggcggcccggggagggcgcacacggtccgcgacctcgcggaggagggg
aagaagcgggccgtgctgctcctcgtcttcgccttcggcctcgccttcctcatgtccctg
acaagctcctcagtttggattaacttgccatttgccacagctttgattgttttatttcgc
tacatatcacttgactatgatttccgtagaaagagcacaactaccacagataacgatgcc
agtcgcgcacttaccaaaacaaaaagtattgaaccaaataaaatcccctctattcaaaag
gatggaaagtcagattggaagagcaaggtgaattcccctccagttgaagctgcaattgaa
cagttcacaaggcaccttgtcacagagtgggtaacagatctatggtactcccgtgtaaca
cctgacaaggaaggtccagaggaactcatcaatatagttaataatgtcctgggagagata
tcagtccgggcaagaaacgttaaccttatcgctctgctaaccagggatctgattgatctt
atatgcaaaaatttggagctttatcatttatgccaagccaagattggaaaagagaagttt
gttaatctctcgacggagcgtcgtgatgctgaactaaaactgacccttataaccgaaaac
aagttgcatccagctttattttcagccagtgctgagcacaagatcctacaaagtcttgct
gatgggttgatatcagtaacagcaaaacctcaggatctgcagtgttacttcttccgatgt
actgcacgagaacttcttgcatgtgcagtcatgagacctgtcgtgaatttagcaaaccca
aggtttataaatgaaagaattgaattgttggctctttctcatgccaacaaggcagaaaga
ggagttgcagaatcattggagcatgctacaatggttaagcaaagggaacctcctatgcca
actgttgatgaacttgctgcactaatagatcccacgagttcaggggttgaacttgtgcga
tttagtcaggatcagtccaaagctgcaccagatacgcaactcagtaatactagacatcca
tctaacctcaaaccaaattcctctagtacttctttgaccaatagttcacatccacttgag
tctagcattttatcttccactacccatggtcattcgaattccagtatgtcattgcattcc
caaagtagtggcaggacaactgcagaatgttatgagggagaatgggcacagaccatggat
atcagctcccagcgaaaaagtcaagccctagcacctgagcaccttgagaacatgtggact
aaagggaagaattacaaatcagaaaatgtaaaacatgttgcgagagtaccttccaaatct
tcttctctaggcacttctccagtgcagcagtcagctccttacagcacttctgttggtcat
tatcctagtgctccacaaaggcagacaactatgtctcgttctgatgaccaacatttgatt
aaacactcaactactgctgcatacttaaatggcaccaatcatctgaggatggctttatcc
agagaaagtgcagatcatgccagccaagaagactttggagtggacagtgagagttcatat
gccactgaggaggatgagaataacaatgtgactgggcttgactctccagtaacgagagtt
tgggacagcaaaagtaaaggaaatgccacctcatcacatatacaccatccacttgaatct
ccaggtttccataaagcaaagaagaacagaagtcatattggcaagttgaaaatgacaaaa
acttcaggaagaaaaaggtcaaggtcaaattctcaaaagcctcctgtctggctagaggtg
gagagatcatctttattgatgggggatgatttagatatactgaatacatcggcagatgat
tcaaggacggatggactgtatgatgatactgaggtggaaagtatgtcaaggatgtttagt
ggtgcgaatgcttcatctttgtcattggcatcaactgactcttcatattcatcaaattat
tccaccactaatgtgctagaagactcttatttgaagttgaaatgtgaggtggtaggagct
agcattgtgaaaagtggatctggcatgtttgctgtatattctgtttctgtgactgatgcc
aatggtaatagttggtccatcaagaggagatttcgccatttcgaagagctacatcggcgt
ttgaaagaatattctcagtacaatcttcacttgcctccaaagcacttcctttcgtcaggg
ctagaggtccctgttgttcgagagagatgcaagttgcttgacatatatctaaagaagctt
cttcagattcccactgtttcaagctgtatagaggtctgggattttctaagtgttgattca
cagacatacatcttcactgacactctctcagttatccagacgttgtcagtcaatttagat
gaaagatcaaaagagaagaatacaaaatcattcaattcttcccaagctttgaatgggaat
ttggtctctgctagccaatctttgcatgtacataaagatgataccatgccaaaggagaag
gataaagactttgatgctgttgatggtttgagatcaaggaagaggaacacggaacagaat
ttaggaattggtgttggcaacacaaatgccaatcttcatgaagacctctctggaagtgac
cctgaacagaacgagcattcatttataataaattcgggaaattctaaaaagacactgtca
agtgaaactgactacccgcctcaaagtttggagtctgatggatactcagtagctcctaat
gattggatggctccaaatcttagtgtgcccttatttcatttggttgatgtggtttttcag
ctccaagatggtggctggatcaggaggcaagcattttggatagtgaagcaaatactgcaa
ctgggaatgggagacacatttgatgactggcttgttgagaaaatccagttacttaggaag
gggaggattgttgcttttgcagttaagcgggttgaacaaatactctggccagatggaatt
ttcctgacaaaacatcctaagagaaaagcagcaacacctccacctggttcccagagtaac
ggcatggccaactatctgactgatgaacaacgactagaggatgctcatcgtgcaaatttt
gtccatgaactaatgatagagaaagcaccatctgcgttagtgagtctggttggtcgaaag
gagtacgaaagatgtgctcaggacgtctacttctttcttcagtctccagtttgtttgaag
cagctagcatttgaagtcctagagctccttgtactagctgcatttccagagttggatgac
attgtgaagaagtggcatgaagacaaacagcagttgtacgtcctggaataa
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