Oryza glaberrima (African rice): 127773877
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Entry
127773877 CDS
T08853
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127773877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127773877
03110 Chaperones and folding catalysts [BR:
ogl03110
]
127773877
03029 Mitochondrial biogenesis [BR:
ogl03029
]
127773877
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127773877
Enzymes [BR:
ogl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
127773877
Messenger RNA biogenesis [BR:
ogl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
127773877
Chaperones and folding catalysts [BR:
ogl03110
]
Heat shock proteins
HSP60 / Chaperonin
127773877
Mitochondrial biogenesis [BR:
ogl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
127773877
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127773877
Exosomal proteins of other body fluids (saliva and urine)
127773877
Exosomal proteins of breast cancer cells
127773877
Exosomal proteins of colorectal cancer cells
127773877
Exosomal proteins of bladder cancer cells
127773877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
127773877
NCBI-ProteinID:
XP_052156056
UniProt:
I1PXH5
LinkDB
All DBs
Position
5:complement(23566626..23571360)
Genome browser
AA seq
581 aa
AA seq
DB search
MYRAAAAAASSISRSSSALRKQLSRGGGGEQRLWARGYAAKEVAFGVGARAALLQGVNDL
ADAVKVTMGPKGRNVIIERSHRAPKVTKDGVTVAKSIEFEDSAKNVGANLVKQVAEATNK
VAGDGTTCATVLTQAILTEGCKAVAAGVNVMDLRNGINKAISSITTHLKSKAWIINSSEE
INQVATISANGEKEIGDLISKAMEKVGKDGVITITDGKTLDNELEAVQGMKLSRGYISPY
FVTDQKTQKCEIENPLILIHDKKISTMNSLLPVLEMSIKNRRPLLIIAEDVEGEALSMLV
LNKHRAGLKICAVKAPGFGENRRANLDDVAVLTGGEVVSEDQGLDLGKVELQMLGTAKKV
TVSLDDTIILDGGGDKQQIEERCQQLRESMDKSTAVFDKEKAQERLSKLSGGVAVLKIGG
ASEVEVGEKKDRVTDALHAARAAVEEGIVPGGGVALLYATKELDKIITANEDEKIGVQII
KNALKAPLMTIAANAGIDGGVVIGKLIEQDNLNLGYDAARGEYVDMIKAGIIDPVKVIRT
ALQDASSVSLLMTTTEAAVAEPPAAKARMASRMPQMSGMDF
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgggcggcggcggcggcggcgtcgtcgatttcgaggtcctcgtcggcgctgcgg
aagcagctgtcgcgcggcggtggcggggagcagcggctgtgggcgcgagggtatgcggcg
aaggaggtggcgttcggcgtcggagcccgggccgccttgctgcagggcgtgaacgacctc
gccgacgccgtcaaggtcaccatgggccccaaggggcgcaatgtgattatcgagagatcc
catagagctcccaaagtcacaaaggatggagtcacggttgcaaaaagcattgagtttgag
gacagtgctaagaatgttggtgcaaacctggtgaagcaagttgctgaagctactaataag
gtcgcaggagatggtaccacttgtgcaactgtacttacacaggctattcttacggaaggc
tgcaaggctgtggcagcaggggtcaatgttatggacttacgtaatggcataaacaaggcc
ataagttctatcactacacacctcaaaagtaaagcatggattatcaactcctcagaagaa
ataaatcaggtagcaactatttctgcaaatggagaaaaggaaataggagatttgatatca
aaggcgatggaaaaggttggaaaggatggagttattactattactgatggcaagacatta
gacaatgagcttgaagcggtacagggaatgaaactttccagaggctacatatctccttac
tttgtgactgatcagaagactcagaagtgtgagatagaaaatcctcttattctaattcat
gacaagaaaatctcaacgatgaattcacttcttccagttttagaaatgtctatcaagaat
cgtaggcctcttctcatcattgctgaggatgttgagggagaagctctatcaatgcttgtt
ctgaacaagcatcgtgctggattaaagatatgtgctgtcaaagctcctggatttggtgaa
aacagaagagccaatctggatgacgtggctgtgttgacaggaggagaggttgtcagcgag
gaccaaggtcttgatcttggtaaagtcgaactacaaatgcttggcactgctaaaaaggtt
actgtatcccttgatgatactatcattctagatggtggaggcgacaaacagcagatagag
gagaggtgtcaacagcttagagaatcaatggacaaaagcactgctgtatttgacaaagaa
aaggctcaagaacgtctatcaaagttatctggtggtgttgctgtcctcaagattggggga
gctagtgaagttgaagttggtgagaaaaaagatagggtaacagacgctttacatgcagca
agggctgctgtggaggagggcattgtaccaggtggtggagttgcccttctgtatgccacc
aaggagcttgacaagattatcacagcaaatgaggatgaaaagattggagttcaaattatc
aagaatgctttgaaggctcctttgatgactatagctgcaaatgctggcattgatggtggt
gtggtcattgggaagctaattgaacaagataatcttaatctgggctatgatgcagcaaga
ggggagtatgttgacatgattaaggctgggatcatcgaccctgtgaaagtcatccgaaca
gcgctacaagatgcatcaagtgtttctttgctgatgacaacgacagaggcagctgttgct
gagcccccagcagcaaaggccagaatggccagtcggatgccgcagatgagcgggatggat
ttttga
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