Oryza glaberrima (African rice): 127773898
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Entry
127773898 CDS
T08853
Name
(RefSeq) MADS-box transcription factor 4 isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127773898
Transcription factors [BR:
ogl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
127773898
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GFIT
Motif
Pfam:
SRF-TF
K-box
HALZ
Atg11_middle
Motif
Other DBs
NCBI-GeneID:
127773898
NCBI-ProteinID:
XP_052156083
UniProt:
I1PVS6
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Position
5:18088430..18090956
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AA seq
210 aa
AA seq
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MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTP
KTTLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKE
LIAIEEALNNGQANLRDKMMDHWRMHKRNEKMLEDEHKMLAFRVHQQEVELRGGIRELEL
GYHHDDRDFAASMPFTFRVQPSHPNLQQEK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcggcaagatcgagatcaagaggatcgagaactcgacgaaccggcaggtgacg
ttctcgaagcgccgcgccgggatactcaagaaggcccgcgagatcggcgtgctctgcgac
gccgaggtcggcgtcgtcatcttctccagcgccggcaagctctccgactactgcacgccc
aagaccacgctgtcaaggatcttggagaagtaccagaccaactccgggaagatactctgg
gatgagaagcacaagagcctcagcgcagagatcgatcgtgtcaagaaggagaacgacaac
atgcagatcgagctcaggcatatgaaaggggaggatctgaactccctgcagcccaaggag
ctgatcgcgatcgaggaggcgctcaacaacggccaggccaatctgcgggacaagatgatg
gaccactggaggatgcataaaaggaatgagaagatgctggaggacgagcacaagatgttg
gcttttagggtgcaccagcaggaggtcgagctgaggggcggcataagggagctggagctc
ggctaccaccacgacgacagggacttcgcggcctcgatgccgttcaccttcagggtgcag
cccagccaccccaacctccagcaggagaagtag
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