Oryza glaberrima (African rice): 127774022
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Entry
127774022 CDS
T08853
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogl01002
]
127774022
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127774022
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127774022
Peptidases and inhibitors [BR:
ogl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127774022
Ubiquitin system [BR:
ogl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127774022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
127774022
NCBI-ProteinID:
XP_052156252
UniProt:
I1QKR8
LinkDB
All DBs
Position
5:22196523..22202749
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AA seq
643 aa
AA seq
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MAPAVQPPPSPPPPRRPRSGPPPGLKNLGNTCYLNSVLQCLASTPPLATFCLSFRHSNLC
KKVLPNKDKECVFCVVERQISRLLRTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFL
RYIIDACHTAGLCIRKRLPASNANGDAGEEEVRVQGPCMVMKETFGGALLSQVKCLTCKG
ESNKTDEIMDISLDLPGSNSVADALARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRA
PKVLVIQLKRFEGINGGKINRNIEFKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPD
SGHYYAYVKDAIGRWYCCNDSHISPSSSQDVLSEKVYILFYILSTKTQKPSTNGYSSSAA
KSSNSNGNGISNATSNEPLKIPLVKQNGLCSSKGIAPPPLKNGKIAPGMHLKPIHLKNNG
TGKVSNGKASIIPGNKLEVSEGLTLPAVNGRDSGKYAEPGKMNANGSVSCNKTDVNSQRV
LPNTNGNGNPIHFSDLQETTDAKATCAEQYSEKSSIASLEDSKNPVSCHEMSAVIVKDVV
SSGKDSSSLKHRLEEGKFKEMLAESASSELHLSGWVDDVRNFMHTIKRRRLQNTGTPQDS
DTMRKELISESGRIFRSKIPESLREHLIQALRSYYQDKFSLGG
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgccgttcagccgccgccgtccccgcccccgccgcggcggccccgctcgggc
cctccaccggggctgaagaatctcggcaacacctgctacctcaacagcgtgctacagtgc
ctcgcgtcgacccctcccctcgctaccttctgcctctccttccggcactccaatctgtgc
aagaaggtgttgccgaacaaggacaaggagtgtgtgttctgtgtggtggaacggcagatc
tcgcggctgcttcggaccgaagcaggggcgctagactcgccagcgaagatcatacgctgc
ctgccgctctttgccgagcatttccggtggggccgccaagaggatgcgcacgagttcctg
cgctatattatagacgcttgtcacaccgctggtctgtgcatacgcaagcggctacctgcg
tcaaacgccaatggggacgctggcgaggaggaggtccgggtgcaagggccatgtatggtg
atgaaggagacatttggcggtgcgctgctcagccaagtgaagtgcctcacctgcaaggga
gagtcaaacaagaccgacgagataatggatatcagcctcgacctgcctggaagcaattct
gttgctgatgcgcttgcccgtttttttcagcctgagatattggagggttcaaacaagtac
agctgcgaaagatgcaagaagctcacctcagcacggaagcaattgtttgtccttagggca
cctaaggtgctcgtcatacaactcaagagatttgagggaataaatggtgggaagatcaac
aggaacatagaattcaaagagactctctttctttctgacttcatgtataataaaaaccag
gattcactgccagtatataatctttttggcagtattgttcactcagggttctctccagat
tctggtcattactatgcgtatgttaaggatgctattggtcgctggtattgttgtaatgat
tcccatatctccccctcaagctctcaggatgttctatctgagaaggtctacatcctattc
tatattctgagtaccaaaactcaaaagcctagtacaaatggttactcttctagtgcagct
aaatcttccaacagcaatggaaatggcatatcaaatgccacatctaatgagcccctgaag
ataccactagtaaaacagaatggactatgttctagtaaaggtattgcaccgccacccctg
aagaatggcaagattgcaccaggtatgcacctcaagccaatccacttgaagaataatgga
acggggaaagtttcaaatggcaaggcaagcatcattccgggcaataagctagaagttagt
gagggtttaacactgccagcagtgaatggccgtgactctggaaaatatgcagaacccggt
aaaatgaatgctaatggtagtgtttcttgcaataagacagatgttaattcacagagagtg
ttgcccaatacgaatggaaatggaaatccaattcacttttctgatcttcaagagaccact
gatgctaaggctacatgtgctgagcaatattctgaaaagtcatctattgccagtttagag
gattctaaaaatcctgtttcatgccatgaaatgtctgcagtcatagtaaaggatgtggta
tcttcgggtaaggacagttcttccttgaagcaccgtcttgaagaagggaagtttaaggaa
atgcttgctgaatcggcatcttctgagcttcacttgtctggttgggtggatgatgtccgt
aatttcatgcacactataaagagacgccgtctacaaaatacaggcacgcctcaagatagt
gacacaatgagaaaggagctgataagcgaatctggaagaatatttaggtcaaaaattcca
gaatcgctgagggagcatctcattcaagccctgcggtcatattaccaggacaaattttca
ctgggaggataa
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