Oryza glaberrima (African rice): 127774094
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Entry
127774094 CDS
T08853
Name
(RefSeq) scarecrow-like protein 9
KO
K27753
GRAS family protein LISCL
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127774094
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Other transcription factors
GRAS
127774094
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
127774094
NCBI-ProteinID:
XP_052156327
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Position
5:complement(474126..476481)
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AA seq
629 aa
AA seq
DB search
MDSPEYCQTNSNITLDYINRILMEEDIDEKISIKKGQDALQATEKPFYDILGKAYPSSSK
ETAINGDSQADYPDNGSSSYHEQACSGSFVSDLLGSQDAHSITTDWSSEFDRLALQFRRG
VEEAKRFIPNIEKLVDDPEKNGLYACKQTTETTEQKGKHENKIRNHPHDPHVEHIELMEA
RNSKHMAISTSETIRDEMFDSILLCNRQLPGEVANLRGMMAKEASDNPKKFQSKGYGKGQ
RKPHSSKKKQKEAIDLSVLLIQCAQAIASNNHPFASELLRKIRHHALPDGDGSQRLANCF
ADGLEARLAGTGSQMYEKLMAKQTSTRDMLKAYHLYFVACPFEMVTYYFSNKTIIDALEG
KTTLHIVDFGILFGFQWPCLIQRLAKREGGPPKLRITGVDVPQPGFRPHERIEETGKRLA
EYANMFNVPFQYHGIASRWETICIEDLSIDKDEVLIINCMSRMRKLGDETENIDSARDRV
LHMMKRMNPQVFILGVVNGLYSSPFFLTRFREVLFHYSSLFDMLDNNVPRNHEARILVEK
DLFGNDALNAVACEGAERIERPESYKQWQMRILRAGFKQRPVNQAILNRSVHYKELYHED
FVIDEDSGWLLQGWKGRIIQALSTWKVET
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggacagccctgagtattgtcagaccaactcaaacataactcttgattatataaacaga
atattgatggaggaggatattgatgaaaagatcagcataaaaaaaggacaggatgcactt
caggcgacagagaagcccttctatgatattcttgggaaggcatacccatcttcatctaag
gagacagcaattaacggtgacagtcaagcagattaccctgataatggtagcagcagttat
catgaacaggcatgtagtggtagctttgttagtgatctccttgggtcacaggatgcgcat
tcgataaccaccgactggtcttctgaatttgaccgtttggctttgcaattcaggagaggt
gttgaggaagcaaagaggttcattccaaatattgaaaagttggtggatgatccagagaag
aatggtctttatgcttgcaaacaaacaacagagacaacagaacagaagggcaagcatgag
aacaaaataaggaatcatcctcatgatcctcatgttgagcacatagagttgatggaagca
aggaacagtaagcatatggccatctccactagtgaaacaatacgggatgaaatgtttgat
agtattctgctctgcaataggcagctccctggtgaagttgctaaccttagaggaatgatg
gcaaaagaagcaagcgacaacccaaagaaatttcaaagcaaaggatatggaaaagggcaa
aggaagccacacagtagtaagaagaaacagaaagaggcaatagatctcagtgttcttctc
atccaatgtgcacaagcgatagcatctaacaaccatccctttgctagtgagctactgagg
aaaataaggcatcacgctttgccagatggagatggttctcagaggctagcaaactgcttt
gcagatggcctcgaggctcgcttggctgggactgggagtcaaatgtacgaaaaactgatg
gcgaaacaaacgagcaccagagacatgctaaaggcctatcatctatattttgtagcatgc
ccttttgagatggtaacatactacttctccaacaaaaccatcattgatgcattggagggg
aaaacaacattgcatatcgttgattttggcatcctcttcggctttcagtggccatgtcta
attcagcgacttgcaaagcgagaaggtggcccccctaagcttcgaatcacaggtgtagat
gtaccccagcctggttttcgccctcatgaaaggattgaggagactggaaagcggttggca
gagtatgcaaatatgttcaacgtacctttccagtatcatggcattgcttcaagatgggaa
actatctgcatcgaggatctcagtattgacaaggatgaggtactcataatcaactgcatg
tcacgaatgagaaagctaggtgatgagacagaaaacattgatagtgcaagggatagggta
ctacacatgatgaagaggatgaacccgcaggttttcattcttggtgttgtgaatggattg
tacagctccccattctttctgactagattcagagaggttttattccattactcatcactt
tttgatatgctcgacaacaatgttcctaggaaccatgaagcaaggatattggtagagaag
gatctctttgggaatgatgcacttaatgctgtagcatgcgaaggtgcagaaaggattgag
aggccagaaagctacaaacagtggcaaatgaggatcctcagggctgggttcaagcaacgt
cctgttaatcaagccattctgaatagatcagtacattacaaggaactttatcatgaagac
tttgtaattgatgaagatagtggctggctgctgcagggatggaaggggaggataatacag
gcactgtcaacatggaaagtggaaacctag
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