Oryza glaberrima (African rice): 127774346
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Entry
127774346 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127774346 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127774346
Enzymes [BR:
ogl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
127774346
Transfer RNA biogenesis [BR:
ogl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127774346
Prokaryotic type
127774346
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
127774346
NCBI-ProteinID:
XP_052156532
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Position
5:complement(9756147..9765331)
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AA seq
338 aa
AA seq
DB search
MLGLAPLRFVSPPPRGAAAAIGGHSISLGDGCHCAVPPPGEKDADKARAETTEGASYKWR
MVIAYDGTKFKGWQYQPSPPTIQCSIENALTRITKLDRKELCLVGAGRTDTGVHAWGQVA
HFTTPFSYHCLDSMHSAINGLLPHEIRVREISAAKPEFHARTSTRSKIYHYKIYNGPVMD
PFHNHYAYHSAYKLNSQAMREAAKHFVGTHDFTSFANAVHNDRVRSPIKKIMRFDVIEMG
AILQLEIEGTGFLYRQVRNMVALLLQVGREALPPDIVAKIIAARDRKELAKVALSAPPHG
LYLMSVNYDKEMLQPPEGAPHISFGRTHQISKCKLLFY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtttagcaccactccggtttgtttctccccctcctcgcggcgccgccgccgct
atcggcggacatagtatctcgctcggggatggctgccattgcgcggtgccgccgccgggg
gagaaggacgccgacaaggcgcgggcggagacgacggagggagcgtcgtacaagtggcgt
atggtgatcgcctacgacgggaccaagttcaaaggttggcagtatcaaccatcgcctcca
accatacaatgtagtattgagaatgcgctaacacgcatcacaaagctggatcgcaaggag
ctctgcttggttggagctggcagaacagatacaggtgttcatgcatggggtcaggtggcg
catttcaccacgcctttttcctaccattgtcttgatagcatgcactctgcaatcaatggg
cttcttccacatgagattcgagtgagggaaattagtgcagcaaagcctgaatttcatgcc
cggacatccacaaggagcaaaatttatcattacaagatttataatggaccagtcatggat
ccctttcataatcattatgcataccatagtgcgtataagcttaattcacaagctatgcgg
gaggctgcaaagcattttgttggaacacatgactttacatctttcgctaatgcagtacac
aatgatcgtgtacgcagtcccataaagaagataatgcgctttgatgttattgaaatgggt
gctatcttacagcttgagattgaaggcactggctttctgtacagacaagttaggaacatg
gtagctttgttgctacaagttggaagggaggcactaccacctgacatcgtcgcaaaaatc
atcgcagcaagagaccgcaaggaactagcaaaggtggcattatcagcaccacctcatgga
ttgtacctcatgtcagtcaactatgacaaggaaatgctacagcctcctgagggtgcccct
cacattagctttggaaggactcatcagattagcaaatgtaaactcctattttattga
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