Oryza glaberrima (African rice): 127774352
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Entry
127774352 CDS
T08853
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127774352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127774352
Spliceosome [BR:
ogl03041
]
Common components
Common spliceosomal components
SR proteins
127774352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
Nup35_RRM_2
RRM_5
SET_assoc
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
127774352
NCBI-ProteinID:
XP_052156539
LinkDB
All DBs
Position
5:complement(935629..939055)
Genome browser
AA seq
323 aa
AA seq
DB search
MPRYDDRYGSTRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKRDYAFIEFSDPRDAEEA
RYNLDGRDVDGSRILVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAG
DWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRGRGRSRSYSRSRSRSRSYSR
SRSRSLSGSPRARRELERSRSLSYSRSPRRSISPAANEKKRSPTPDGSRSPRSPQDQVSP
PPKDNAERNGSDHGDSPRGRENSRSTSDGYRSPAAANGRSPSPRNNGSPSPMDNGSRSPR
DGNGDGGSRGGSRSPRPSESPEA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctatgatgatcgttatggaagcacgcgcttgtatgttggtagactgtcttcc
cgcactcgttctcgtgacctagaataccatttcagcagatatggaagaatacgtgaagtg
gagttgaagcgcgactacgcatttattgagttcagtgatccccgtgatgctgaggaagca
aggtacaaccttgatggcagggatgttgatggaagccgcattcttgttgagtttgctaaa
ggggttccacgtggtcctggtggttcacgtgaatatatggggagaggacctcctcctgga
acaggtcgttgttttaactgtgggattgatggtcactgggcaagagactgcaaggctggt
gactggaagaacaaatgttaccgctgtggggagagaggtcacatagaaagaaactgtcaa
aacagcccaagaaatctcaggcgtgagagaagttattcacgctctccatcgccacgccgt
ggacgtggtcgcagtcggagctatagccggagccggagccggagccgcagttacagccgg
tctaggtccagatccctgtctggatctcccagggcacgcagagagcttgaaagatcaagg
agtcttagttacagcaggagtcccaggcgatccatctccccagcagcaaatgaaaagaag
cgcagccccacccctgatggtagccgtagtccaaggagtccacaggaccaggtgagccca
ccacccaaggataatgctgagcgtaatggctcagatcacggtgacagcccccggggcagg
gagaacagcaggagcacgtctgatggctaccgtagccctgcagctgccaacgggcgcagc
ccaagcccaaggaacaatggaagccctagcccaatggacaacggtagccgaagtcctagg
gatggaaatggtgacggtggtagccgtggtggctcacgctcacctagaccgagcgagtcc
cctgaagcctga
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