Oryza glaberrima (African rice): 127774421
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Entry
127774421 CDS
T08853
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127774421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127774421
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127774421
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127774421
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
127774421
NCBI-ProteinID:
XP_052156624
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All DBs
Position
5:2618857..2620266
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AA seq
401 aa
AA seq
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MARSIASSSRRRVMAALDHEGDTMARKKHRVYVAIEEIESHGHEEDDDGGEEVEEEDEQS
HGEADGDGDDAAAAMEESDGHDEEGDNGGDEPDQSPDGDDMEEEEERGGGGVHGGEAEVE
TFRHSKQASSARPVVAVAGVTVEDADALECSVCCLPLRPPIFQCEVGHVVCAPCRDKLAP
AGRCHVCRAAVAGGEYRRCHALERLVDAIRVACPHAAHGCGATPAYHALDAHRRACPHAP
CRCPGESCGFAGSTAALLDHFAAAHAWPCVADVRAGETHRLHDGFNFHRVEHRGGGDHRL
IMLNMTREPLGRAISVLCIHPHAAPAAEMQCELRLHVSRPADDAGGGLCISHYQKSVFHI
GYSDLADGVPDRRRRFQFVVPRHVVGGDNEDGVQIRVRIKY
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcgagatcgatagcctcttcttccaggcggcgagtcatggcggcgttggatcacgaa
ggtgacaccatggcgaggaagaagcatcgcgtctatgtcgcaatcgaggagatcgagagc
catggccacgaggaagacgacgatggcggcgaggaagtggaggaggaagatgaacaaagc
catggcgaagctgatggtgatggtgatgatgctgcagctgcgatggaggagagtgatggc
cacgacgaggaaggagacaatggcggagacgagcctgatcaatcacctgatggtgatgat
atggaggaagaagaggaaagaggcggcggcggcgtccatggtggggaggcggaggtagag
acgttccgtcactccaagcaggcgtcgtcggcgcgcccggtggtcgccgtcgccggcgtg
acggtggaggacgccgacgcgctcgagtgcagcgtgtgctgcctcccgctgaggccgccc
atcttccagtgcgaggtggggcacgtcgtgtgcgcgccgtgccgcgacaagctggcgccg
gcggggaggtgccacgtctgccgcgccgccgtcgccggcggcgagtaccggcgctgccac
gcgctggagcgcctggtggacgccatccgcgtggcatgcccgcacgccgcgcacggctgc
ggcgccacgccggcgtaccacgccctcgacgcgcaccgccgcgcgtgcccgcacgcgccg
tgccgctgccccggcgagtcctgcggcttcgccggctccaccgccgcgctcctcgaccac
ttcgccgccgcgcacgcctggccgtgcgtcgccgacgtcagggccggcgagacgcaccgc
ctccacgacggcttcaacttccaccgcgtcgaacaccgcggcggcggcgaccaccgcctg
atcatgctgaacatgacgcgcgagccgctcggccgcgccatctccgtgctctgcatccac
ccgcacgccgcgcccgccgccgagatgcagtgcgagctccggctgcacgtctcgcgcccc
gccgacgacgccggcggcggcctgtgcatcagccactaccagaagtcggtgttccacata
ggctacagcgacctcgccgacggcgtgccggatcgccggcggcgcttccagttcgtcgtg
ccgcgacatgtcgtcggaggagacaacgaggatggcgtccaaatccgtgtgcgtatcaag
tattaa
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