Oryza glaberrima (African rice): 127774540
Help
Entry
127774540 CDS
T08853
Name
(RefSeq) syntaxin-32
KO
K08490
syntaxin 5
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127774540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127774540
Membrane trafficking [BR:
ogl04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
127774540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
BOS1_GOSR2_MEM11-like_N
TAF2_3rd
ISG65-75
ArAE_1_C
DUF16
CREPT
Motif
Other DBs
NCBI-GeneID:
127774540
NCBI-ProteinID:
XP_052156762
UniProt:
I1NKT6
LinkDB
All DBs
Position
1:3639864..3644135
Genome browser
AA seq
344 aa
AA seq
DB search
MNPGRPAPASFRDRTNEFRAAVESAARYASSSAAAAPSSSSGGGVGGPLDVSRGAASAHS
EFNRRASKIGLGIHQTSQKLARLAKLAKRTSVFDDPTVEIQELTAVIKKDITALNSAVVD
LQVLCNSQNESGNLSKDTTNHSTTVVDNLKNRLMSATKEFKEVLTMRTENLKVHENRRQM
FSSSAANNASNPFVRQRPLVTRDGPESSVPPAPWASDSATTPLFQRKKTNGDHGASSSSS
QPFMQQQLVQQDSYMQSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDT
LANVEGAQGQLLKYLNSISSNRWLMMKIFFVLMVFLMIFIFFVA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggggcgcccggcgccggcgtcgttccgcgaccgcaccaacgagttccgcgct
gccgtcgagagcgccgcgcgctacgcctcctcctccgcggcggcggcgcccagcagcagc
agcggcggcggcgttggcggcccgctcgacgtgtcgcggggggcggcctcggcgcactcg
gagttcaaccgccgcgcctccaagatcgggctcgggatccaccagacctcgcagaagctc
gcccgcctcgccaaactggcaaagaggacatctgtttttgatgaccctacggtagagata
caagagctgactgcagttatcaagaaagatatcactgctttgaattctgccgttgtagac
ctacaggttctctgcaattcacaaaacgagagcggcaacctttccaaggatacaacaaat
cattccactacagttgtggacaatctaaaaaatcgcctgatgagcgcaacaaaagaattt
aaggaagttcttaccatgcggacagagaacttgaaagttcatgagaatagaaggcaaatg
ttctcatcatcagctgcgaacaatgcatcaaatccatttgttcgtcaacgtccccttgtt
accagggatggtcctgaatcctctgtacccccggcaccatgggccagtgattctgccact
actccattgtttcagaggaagaagactaatggagatcatggagcatcatcatcatcttct
cagccattcatgcagcagcagttagtacagcaggacagttacatgcagagtagagcggag
gctctccaaaatgttgaatcaaccatccatgagctaagcaacatttttacacaactggca
actatggtttctcagcagggagagctagcaatcagaattgatgagaacatggatgacaca
ctagccaatgttgagggagctcagggccagctactgaagtatctcaacagcatttcatcg
aaccggtggctgatgatgaagatattctttgtgctgatggttttcctcatgatctttata
ttcttcgttgcatga
DBGET
integrated database retrieval system