KEGG   Oryza glaberrima (African rice): 127774580
Entry
127774580         CDS       T08853                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-2
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03010  Ribosome
ogl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    127774580
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127774580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ogl03011]
    127774580
   04121 Ubiquitin system [BR:ogl04121]
    127774580
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogl04147]
    127774580
Ribosome [BR:ogl03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    127774580
  Archaea
    127774580
Ubiquitin system [BR:ogl04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   127774580
Exosome [BR:ogl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127774580
  Exosomal proteins of colorectal cancer cells
   127774580
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD Thioredox_PDIA6_C TBK1_ULD UBL_UBAC1 DUF2604 Ubiquitin_5 IBR Fer2_3 OTU1_UBXL
Other DBs
NCBI-GeneID: 127774580
NCBI-ProteinID: XP_052156807
LinkDB
Position
5:3046991..3047727
AA seq 155 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDATGKVTRLRK
ECPNNDCGAGTFMANHFDRHYCGKCGLTYVYNQKA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg
gacaccatcgacaacgtgaaggccaagatccaggacaaggaagggatccccccggaccag
cagcgcctcatcttcgccggcaagcagctcgaggatggccgcaccctcgccgactacaac
atccagaaggagtccaccctccacctcgtgctccgcctccgcggcggcgccaagaagcgc
aagaagaagacgtacaccaagcccaagaagatcaagcacaagcacaagaaggtgaagctc
gccgtgctccagttctacaaggtggacgacgccaccggcaaggtcaccaggctcaggaag
gagtgccccaacaacgactgcggcgcgggcaccttcatggccaaccacttcgatcgccac
tactgcggcaagtgcggcctcacctacgtctacaaccagaaggcctag

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