KEGG   Oryza glaberrima (African rice): 127774605
Entry
127774605         CDS       T08853                                 
Name
(RefSeq) F-box protein SKP2A-like
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127774605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ogl04121]
    127774605
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     127774605
SSDB
Motif
Pfam: LRR_6 LRR_At5g56370 LRR_4 F-box-like LRR_Zer-1 LRR_8 F-box LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 127774605
NCBI-ProteinID: XP_052156834
UniProt: I1PVT5
LinkDB
Position
5:18175867..18179708
AA seq 376 aa
MVSGRSANGELDACFRSLMLSIGSGRGQAEGGGAMPTLSGWKDLPIELLLRIMSIVGDDR
MLVVASGVCTGWRDALGWGLTNLSLSRCQQNMNNLMISLAHKFTKLQVLTLRQNIPQLED
SAVEAVSSYCHDLRELDLSRSFRLSDRSLYALARGCPQLTKLNISGCSNFSDTALTYLTF
HCKNFKCLNLCGCGKAATDRALQAIARNCGQLQSLNLGWCEDVTDKGVTSLASGCPDLRA
LDLCGCVLITDESVIALATGCPHLRSLGLYYCQNITDRAMYSLANSRVKSKRRRWDSVRS
SSSKEEDGLANLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACA
LHPHRAGRTMVPSHAY
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggttagtgggaggtcagcaaatggggaattggatgcatgcttcagaagcctcatgctt
tcgatcggcagcgggagggggcaggctgaaggtggtggtgcaatgccaaccttgtcaggc
tggaaggaccttcctattgagctgcttctgcggatcatgtcgatagttggagatgaccgg
atgcttgtcgtggcatccggtgtttgcactggctggcgcgacgcgctgggatgggggctt
actaatctttccctctcacggtgccagcagaacatgaataacttaatgatatcacttgct
cacaagttcacgaagcttcaagttctcactcttcgccagaacatacctcagcttgaagac
agtgcagtagaggccgtttccagctactgtcatgatctacgtgagttagaccttagcaga
agttttaggcttagtgaccgttccttgtatgcattagcccgtggctgccctcagcttaca
aaattaaacattagtggatgttccaacttcagtgacactgccttgacctatcttactttc
cactgtaaaaattttaagtgcttgaatctatgtggttgtgggaaggcagcaaccgacaga
gctttgcaggccatagcccgtaattgcggccagctgcaatcattgaacttaggttggtgt
gaggatgtcacagataagggagtgaccagcttggcatcagggtgccctgatctcagggct
ctggacttgtgtggttgtgttcttataacagatgagagtgtgatcgctcttgccactggg
tgtccacacctgcgatctttaggcttgtactactgccagaacatcaccgaccgagccatg
tactccctcgcaaacagccgggtcaagagcaaacgcaggaggtgggacagtgtgaggagc
agcagctctaaggaagaagacggtctcgcaaacctgaacatcagccagtgcaccgccctg
acacccccagcggtccaggcggtctgcgactccttcccggccctccacacttgccctggg
aggcactccctgatcatcagtggctgcctcagcctgacgtctgtccactgcgcctgcgcc
ctccacccgcaccgggctggaagaaccatggtgcctagccacgcatactga

DBGET integrated database retrieval system