Oryza glaberrima (African rice): 127774653
Help
Entry
127774653 CDS
T08853
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127774653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127774653
Spliceosome [BR:
ogl03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
127774653
Complex B
127774653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_MUD2_C
RRM_ACIN1
DUF4523
RRM_YTH1
RRM_occluded
Calcipressin
CHASE8
xRRM
Motif
Other DBs
NCBI-GeneID:
127774653
NCBI-ProteinID:
XP_052156892
LinkDB
All DBs
Position
5:2783557..2786892
Genome browser
AA seq
253 aa
AA seq
DB search
MSGEVAAAVGGGAPEENGAPPNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFK
TLKHKGQAWVVFEDVASATEALKSMQDFPFHNKPMRIQYAKTKSDIIAKADGTFVPRERR
KRNDEKPEKKQKREQHHDVSQVGLGVNAYPGVYGAPPLSQLPFAGAQKVMMPEIIVPNNI
LFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYGDEGQATAAMNHLQGFKI
TKDNQMLISYAKK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgaggtggcggcggcggtcggcggcggcgccccggaggagaacggcgcccct
ccgaacgtcaccatctacatcaacaacctcaacgagaagatcaagctcgaggaacttaag
aaatcgctccgcgccgttttctcccagtttgggaagattcttgatgttctcgctttcaag
actttgaagcataaaggccaagcctgggttgtgtttgaagatgttgcttcagcaactgag
gctttgaagagcatgcaagacttccccttccataataaacctatgagaatccaatatgcc
aagaccaaatcggatattatagcaaaagctgatggcacctttgtacctcgagaaagaagg
aagaggaatgatgagaaacctgaaaagaagcagaagcgtgagcagcaccatgatgtgagt
caagttggcttaggtgtgaatgcttaccccggtgtttatggagctcctccgctctctcag
ctaccttttgctggcgcacagaaggtcatgatgccggagataattgtaccgaataacatc
ctcttcgtccaaaacctcccacatgagacgacccctatgatgcttcagatgctcttctgt
cagtacccagggttcaaggaagtcagaatggttgaagcaaagcctgggattgctttcgtg
gagtacggcgacgaggggcaggctaccgctgccatgaaccatcttcaggggttcaaaatt
acgaaagataaccagatgcttatctcgtatgcgaagaagtaa
DBGET
integrated database retrieval system
