Oryza glaberrima (African rice): 127774742
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Entry
127774742 CDS
T08853
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00040
Pentose and glucuronate interconversions
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127774742
Enzymes [BR:
ogl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
127774742
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Gyro_capsid
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
127774742
NCBI-ProteinID:
XP_052156990
UniProt:
I1PU47
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Position
5:complement(11018578..11023738)
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AA seq
375 aa
AA seq
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MAAIFIFIWLFASVLSISSASSPLLINGSTADAAPDCGTGNPIDDCWRCDPGWADNRQRL
ADCAVGFGRRAVGRKGGRVYVVNDTGDDAARPAPGTLRYGLVQDEPLWIVFAGDMTISSA
HELVVSSRKTVDGRGARVVVGDGGACFAVRGASDVVIHGLTIRRCRPAPKLEAGMSDGDG
VGVHNSSDVWVDHCTVEACADGLIDVVVGSTRVTLSNKLLRNHDKAILLGHNDDYTDDKA
MQVTVAFNRFGPGLVQRMPRCRFGLFHVINNDYIAWQKYAIGGSASPTIISHGNRFYADM
AKEVTKRDDDVPESVWHHWNWVSDGDLMLNGAFFRASGEARTDNLKAPSFARSAPSVPSM
TSSAGALSCKEGSHC
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgccatcttcatattcatatggttgttcgcctccgttttatccatttcatcagct
tcttctcctttgctgatcaatggtagtactgctgatgctgcaccggactgcggtaccggc
aacccgatcgacgactgctggcgttgcgaccccggctgggccgacaaccggcagcggctc
gccgactgcgccgtcgggttcggccgccgcgccgtcggcaggaaggggggcagggtgtat
gtcgtgaacgacaccggcgacgacgcagcccgcccggcacccggcacgctccggtacggc
ctcgtccaggacgagcccctctggatcgtgttcgccggcgacatgaccatcagctccgcc
cacgagctggtcgttagctcgcgcaagaccgtggacggcaggggcgcccgcgtggtggtt
ggcgacggcggcgcgtgcttcgcggtgaggggcgcgagcgacgtcgtcatccacgggctt
accatacgccggtgcaggccggcacccaagctggaggccggcatgtcggacggcgacggc
gtcggcgtccacaactcgagcgacgtgtgggtcgaccactgcacggtggaggcctgcgcc
gacgggctgatcgacgtggtcgtaggttccacccgcgtgacgctttccaacaaactcctg
cgcaaccatgacaaggcaattctcctcggccacaacgacgactacaccgacgacaaggcc
atgcaggtcaccgttgccttcaatcgctttggaccaggcctcgtccaaagaatgccaagg
tgtcggtttggtcttttccacgtcatcaacaacgattacatagcatggcaaaagtacgcc
attgggggcagtgcttcaccgaccataattagccacggcaacagattctatgctgatatg
gccaaagaggtgacgaagcgcgatgacgatgtgccggagagcgtgtggcaccactggaac
tgggtatcagacggcgacctgatgctcaacggcgcgttcttcagggcatcaggcgaagca
aggacagataatttgaaagcccctagctttgcaaggtctgccccctccgtgccgtcgatg
acttcctcggcaggcgccctctcctgcaaggagggctcgcactgctga
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