Oryza glaberrima (African rice): 127774834
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Entry
127774834 CDS
T08853
Name
(RefSeq) transcription factor IIIA-like
KO
K09191
general transcription factor IIIA
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127774834
03021 Transcription machinery [BR:
ogl03021
]
127774834
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127774834
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
127774834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-met
AAA_22
DUF7565
zf-H2C2_2
zf-C2H2_6
zf-C2H2_jaz
CCAP
P-loop_TraG
AAA_16
Motif
Other DBs
NCBI-GeneID:
127774834
NCBI-ProteinID:
XP_052157083
UniProt:
I1PS04
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All DBs
Position
5:1025687..1029456
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AA seq
380 aa
AA seq
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MGSVELGAEEREVAGGEGGSKGAAPPARDIRRYKCDFCSVVRSKKGLIRAHVLEHHKDEV
DDLDDYLGRGGGETRKEMDHDCKVCGASFKKPAHLRQHMQSHSLERPFSCHVDGCPFSYS
RKDHLNRHLLTHQGKLFACPMEGCNRKFTIKGNIQRHVQEMHKDGSPCESKKEFICPEEN
CGKTFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAHNKSCHRHVVCDVCG
TKQLKKNFKRHQRMHEGSCVTERVRCHLKDCKLSFSKKSNLDKHVKAVHEQKRPFVCGFS
GCGKSFSYKHVRDNHEKSSAHVYVQANFEEIDRERPRQAGGRKRKAIPVESLMRKRVAAP
DDDAPACDDGTEYLRWLLSG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgtggagctcggagcggaggaaagggaggtcgccggcggggagggggggagc
aagggggcggcgcctcctgctagggatattaggcggtacaagtgcgatttctgcagtgtc
gtccgttccaagaaggggttgatccgtgcccacgtcctcgaacaccataaggatgaagtg
gatgatttggatgattacttgggacgcggtggcggcgagacgcgcaaagagatggaccat
gattgcaaggtgtgcggtgctagttttaagaagccggcccatttgaggcaacacatgcag
agccattcacttgagaggcccttttcctgccatgtagatggttgccccttcagctatagc
aggaaggaccatttgaaccggcatctacttacacatcaaggaaagctatttgcatgcccc
atggaaggatgcaaccgtaagttcactataaagggtaatatccaaaggcatgttcaggaa
atgcataaagatggctctccttgtgaaagcaagaaagagttcatctgtcctgaggaaaac
tgtgggaagacttttaaatatgcttctaagttacagaagcatgaggaatcacatgtcaag
ttggattatagtgaagttatctgctgtgaaccaggctgcatgaaggcatttaccaacttg
gaatgcctcaaggcccataacaaatcttgtcatcgacatgttgtctgtgatgtctgtgga
accaaacagctgaagaagaacttcaaacgtcatcagagaatgcatgaaggttcctgtgtt
actgagagggttcgatgccacctcaaggactgcaagttgtcattttcaaagaaatccaat
ctggacaagcatgtgaaagcagtccatgagcagaagcgaccctttgtatgtggattctct
gggtgtggcaagagtttttcgtacaagcatgtaagggacaaccatgagaaatctagtgct
catgtgtacgttcaggctaatttcgaagaaattgacagggaacgaccacgtcaagcaggt
gggaggaagaggaaagccatacctgtagagagtttgatgcggaagagggtagctgctcct
gatgatgatgccccagcttgtgatgatggaactgagtatttgagatggcttctctcaggc
tga
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