Oryza glaberrima (African rice): 127775177
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Entry
127775177 CDS
T08853
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic-like
KO
K02945
small subunit ribosomal protein S1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
127775177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ogl03011
]
127775177
Ribosome [BR:
ogl03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
127775177
Bacteria
127775177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Motif
Other DBs
NCBI-GeneID:
127775177
NCBI-ProteinID:
XP_052157458
LinkDB
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Position
5:23342171..23346524
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AA seq
519 aa
AA seq
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MPPPSLLSLLPAASVSPRSRRAARRRPPTASRLPVRGARAASPLHASSSSSSGGGEGGGG
DELHLLEKPFPSPSPADEDESESTEAAPALSTEEALAPFLKFFQGKSTEPDEDDAAAGGG
GGGGGGYVEEDEEDKGEGSAGAGAGGRGVVYYDPKPGDLAVGVVVGGDGRTLDIDVGAGG
EPALMLAKEAVPMTGEEFEYLACDVASKDAAQFAAEGKVGVVVSGGEGQGEATGGRNGKG
RGRGSPALGVGTVVFTEVLGRTLGGRPLLSARRLFRRVAWHRVRQIKQLNVPIKVKIFEW
NAGGLLTRIEGLRAFLPKPEMMTRPRNFTDLKNTVGQQIHVCITRIDEKANELIISEKEA
WAMTYLREGTLLQGTVRKLFPYGAQITIGDTNRGGLLHVSNITRGQLTSVGDVLKVGEEV
KAIVIKSTAPGRIALSTKDLESEPGLFLSNKEKVFSEAEEMAQRCRDQISEKHQPAELDS
SFDEVAPFDDEAVSYANWKWLRFSKSDKTNFNPRAESSL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccccgtccctcctctccctcctccccgccgcctccgtctccccgcgaagccgc
cgagcggcgcggcggagaccccccaccgcgagccgcctccccgtccgcggagcacgagct
gcgtcgccgctccacgcctcctcctcctcctcctccggtggcggcgaaggcggaggaggt
gatgaactgcacctcctcgagaagccgttcccttccccatcccccgccgatgaggatgag
tctgagtcgaccgaggccgctccggcactgtccacggaggaggcgctcgcgccgttcctc
aagttcttccaggggaagagcaccgagcccgacgaggacgacgcggcggcgggaggcggc
ggcggcggcggcggaggctatgtggaggaagacgaggaggacaagggggaggggagtgcc
ggagctggtgcgggtgggcgtggggtcgtgtattacgaccccaagcccggggacctcgcg
gtcggcgtcgtggtcggcggcgacgggaggacgctcgacatcgacgtcggcgcaggtggc
gagccggcgctgatgctggccaaggaggcggtgcctatgaccggggaggagtttgagtac
ctggcatgcgacgtggcgtcgaaggatgcagcccagttcgccgcggaagggaaggtggga
gtcgtggtcagcggcggggaggggcaaggagaggcgacgggcgggaggaacggaaagggg
agagggagaggttcgccggctttgggcgtcggcacggtggtgttcaccgaggtcctcggt
cgaacacttggcgggcggccgctgctgtccgcgcgccggctgttccggcgcgtcgcgtgg
cacagagtgaggcagataaagcagttaaatgtgcctatcaaggttaaaatttttgagtgg
aatgccggaggcctgctgacaagaattgaggggcttcgggcattcctccctaaacctgaa
atgatgactagaccaagaaacttcacggatctaaagaatactgttggtcaacagatccat
gtctgcatcacaaggattgatgaaaaagctaacgaattgataattagtgaaaaagaagca
tgggcaatgacataccttagggaaggaactcttttgcaagggacagtccgcaaattgttt
ccatacggtgcacaaattacgattggcgacactaacagaggtggattgctacatgtctca
aatataacacgggggcagctaacatccgttggtgatgtgctaaaagtgggtgaggaagtg
aaagctatcgtgattaaatcaacagccccgggcagaattgctctcagtaccaaggacctt
gagagcgaacctggactgtttctctctaacaaggagaaggtgttctccgaggctgaagag
atggcgcaaagatgccgggaccaaatttcagagaagcatcaaccagctgagttagactcc
tcgttcgacgaggttgctccctttgacgatgaggcagtgtcttatgcgaactggaagtgg
ttaagattcagcaaatctgacaaaacaaactttaaccctcgtgctgaatcgagtttgtaa
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