Oryza glaberrima (African rice): 127775187
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Entry
127775187 CDS
T08853
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127775187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127775187
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
127775187
Prokaryotic type
Archaeal type
TFB
127775187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
127775187
NCBI-ProteinID:
XP_052157467
UniProt:
I1PXM3
LinkDB
All DBs
Position
5:complement(23843061..23846403)
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AA seq
319 aa
AA seq
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MHEAAANDGAYCPDCRRATAVVLDHTTGDTICTECALVLDARYIDETSEWRTFANDGASD
DRDPNRVGDRADPFLPDHVGGTTIAYSAAPPKNASAADAAAPLLTRRRVDVVGPSPENAL
VAAFRGIADMADRLGLVATIRDRAKEVFKKLGEAPKGFPRGRNRDTVYAACLFIACRNEG
MPRTYKELASVTAEGAAAKKEIGRLTTLIKKHLGDQGEGRAMDIGVVRSTDYLRRFCSRL
GLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVMQRAGGSKSVRDVSTATGVAEG
TITAAHKELAPHASVLFGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaggcggcggcgaacgacggggcctactgcccggactgccggcgcgcgacggcg
gtggtgctcgaccacaccaccggcgacaccatctgcaccgagtgcgcgctcgtcctcgac
gcgcgctacatcgacgagacgtccgagtggcgcaccttcgccaacgacggcgccagcgac
gaccgcgaccccaaccgcgtcggcgaccgcgccgaccccttcctccccgaccacgtcggc
ggcaccaccatcgcctactccgccgcaccgcccaagaacgcctccgccgccgacgccgcc
gccccgctgctgacgaggaggagggtcgacgtcgtcggcccgtccccggagaacgcgctc
gtcgccgcgttcaggggcatcgccgacatggccgaccgcctcggcctcgtcgccaccatc
cgcgaccgcgccaaggaggtgttcaagaagctcggcgaggcgcccaaggggttcccgcgc
ggccggaaccgcgacaccgtctacgccgcctgcctcttcatcgcgtgccgcaacgagggg
atgccgcggacgtacaaggagctcgcctccgtcaccgccgagggcgccgccgccaagaag
gagatcggcaggctcaccaccctcatcaagaagcacctcggcgaccagggcgaggggcgg
gcaatggacatcggcgtcgtgcgctccaccgactacctccgccgcttctgctccaggctc
ggcctgggccaccaggacgtgcgcgccgccggggacgcggtgcgccgcctcgaggagcgc
ctcgacgtgcggcgcaacccggagtccatcgccgccgccatcatctacatggtcatgcag
cgcgccggcggcagcaagtccgtgcgcgacgtctccacggccaccggcgtcgccgagggc
accatcacggcggcgcacaaggagctggctccccacgccagcgtcctcttcggtggctag
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