Oryza glaberrima (African rice): 127775195
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Entry
127775195 CDS
T08853
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127775195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127775195
04147 Exosome [BR:
ogl04147
]
127775195
04090 CD molecules [BR:
ogl04090
]
127775195
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127775195
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127775195
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127775195
CD molecules [BR:
ogl04090
]
Proteins
127775195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_29
AAA
RsgA_GTPase
ABC_ATPase
AAA_30
Zeta_toxin
AAA_15
HUTI_composite_bact
Motif
Other DBs
NCBI-GeneID:
127775195
NCBI-ProteinID:
XP_052157481
UniProt:
I1NRC7
LinkDB
All DBs
Position
1:complement(27673069..27679037)
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AA seq
1234 aa
AA seq
DB search
MSAAATTGGGGERRSLRGMFKFADRVDVLLMALGTLGAIGDGCSTNLLLIFASDVMNSLG
YARAGAHGGAAAATGVDFMREVEKSCLNFVYLAFAVLAVAFMEGYCWSRTSERQVLRIRY
LYLQAILRQEVGFFDSQEATTSEIINSISKDASLIQEVLSEKVPLFLMHSTVFISGLAFS
TYFSWRLALVSFPLVLLLIIPGLIYGKYLLYLSRQSRHEYTNANSLVEQALGSIKTVYSF
TAEKRIIQRYTAVLDKTIKLGIRQGIAKGLAVGFTGLSFAIWAFLAWYGSRLVMYHHESG
GRIYAAGISFVLGGLSLGMALPELKHFTEASVAATRILDRINRVPEINADDPKGLILDQV
RGELQFESVRFVYPSRPNMTVLKDFNLQIPAGQTVALVGSSGSGKSTAIALVQRFYDATE
GTVKVDGVNIKELQLKWIRSKMGLVSQDHALFGTSIKENILFGKPDATMDELYAAAMTAN
AHNFIRGLPEEYETKIGERGALLSGGQKQRIAIARAVIKNPAILLLDEATSALDSESEKL
VQHALDQASMGRTTLVVAHKLSTVKNADQIAVVDGGTIAEIGTHDELINKGGPYSRLVKL
QKMVSYIDQEGGDQFRASSVARTSTSRLSMSRASPMPLTPGISKETDSSVSPPAPSFSRL
LAMNAPEWRQAVIGSLSALVYGSLQPIYAITIGGMIAAFFVQDLNEMNAIISRYALIFCS
LSVISIVVNLLQHYNFAYMGEHLVRRIRVQVLEKILTFEAAWFDEETNSSGSLCSRLSNE
ASLVKTLVADRISLLLQTASGIIIAVTMGLIVAWKLALVMIAVQPTTMICYYAKKIVLSN
VSRDLAKAQHQSTQIAIEAVYNHRMVTSFGCSSKVLQLFEHTQEEPLKRARKKSWVAGIT
TGLSPCLSFLSWALDFWYGGKLAQSGEISAGDVFKTFFVLVSTGKLIADAGSMTSDLAKG
ANAVASVFEVLDRKSISPQNSQVEKDNQKNKIQGRIEFKRVDFAYPTRPQCLILQDFSLD
VKAGTSIGLVGRSGCGKSTIIGLIQRFYDVDRGAVKVDGMDVREMDILWYRGFTALVSQE
PAIFSGSVRDNIAFGKPEADEDEIVEAAKAANAHEFISSLKDGYHTDCGEHGLQLSGGQK
QRIAIARAIIRNPAILLLDEATSALDAQSEQVVQEALDRIMSGRTTIVVAHRLNTIKNVD
SIAFLGEGKVVERGTYPHLMSKKGAFYNLAALQK
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgcggcgaccaccggcggcggcggcgagcggcggagcctccgtggcatgttc
aagttcgcggaccgggtggacgtgctgctcatggcgctgggcacgctgggtgccatcggc
gacgggtgctcgaccaacctgctcctcatcttcgccagcgacgtgatgaactcgctcggg
tacgcgcgcgccggcgcccacggcggcgccgccgccgccaccggcgtggacttcatgcgc
gaggtcgagaagtcttgtctgaatttcgtgtacctggcgttcgcggtgctggcagtggcg
tttatggaggggtattgctggagcaggacgagcgagaggcaggtgctgaggatcaggtac
ctgtacctgcaggccatactgcggcaggaggtgggcttcttcgactcgcaggaggccacc
acctcggagatcatcaacagcatctccaaggacgcctcgctcattcaggaagttctcagt
gagaaggttccactctttctgatgcactctacagttttcatctctgggctggcattctcc
acatatttctcctggaggctggctctggtttcttttcctctggtcctgctcctgataatt
ccagggctcatctacggcaagtatctcctgtacctctcccgacaatcgcgccacgagtac
acaaacgcaaactcgttggttgagcaagctcttggctctatcaagactgtctactctttc
actgctgagaaaaggataatccagagatacacagcagttcttgacaagacgatcaagctg
gggattagacaaggtattgcgaaaggtttggctgtcggattcacgggcctttccttcgcc
atctgggctttcctcgcttggtacggcagtagactggtgatgtaccatcatgaaagcgga
ggaaggatatatgctgcagggatttccttcgttttgggcggcctatcccttggaatggca
ctccctgaactgaagcatttcacagaagcgtcggttgctgccacaagaattctcgatcgg
ataaaccgtgtgccagagataaatgctgatgaccccaagggacttattttggatcaagtc
cggggagagcttcagttcgagtctgtccgctttgtttacccatcgaggcctaacatgacg
gtcctcaaagacttcaacctccagattcctgctgggcaaactgttgccttggttggatcc
agtggcagcggcaagtcaaccgcaatagcattggttcaacggttctatgatgccactgaa
ggaactgtcaaggttgacggtgtcaacattaaagaactccagctcaagtggatcaggagc
aagatggggcttgtcagccaagatcatgcactcttcggtacatccataaaagagaacatc
ttgtttggcaaaccagatgcaacaatggatgaactctatgcagcagccatgacagcaaat
gctcacaacttcataagggggcttcctgaggaatatgagactaagattggcgagcgtgga
gcactgctatctggtggccagaagcaacgtattgccattgcacgggcagtcatcaagaac
ccggctatacttttgctcgatgaagccacaagtgcacttgattcagaatcagaaaagctg
gtgcagcatgcacttgaccaagcatctatgggaagaacaacactggtagtagctcataag
ctttccacagtgaagaatgccgatcagattgcagtggttgatgggggcactatagctgaa
attggcacacacgatgaactgattaataagggtggcccatattcacgacttgtgaaactg
cagaagatggtgagctacatcgatcaagaaggtggtgaccaatttagggcctcttcagtg
gcaaggaccagtaccagccgtctcagtatgtccagagcaagtccaatgccacttacacca
ggtatttcaaaggaaaccgattcctctgtttctcccccggcaccatctttctccaggctt
cttgcgatgaatgcaccagagtggagacaagcagtcataggaagtctctctgctttggta
tatggttccttgcagcccatctatgctataaccatcggaggaatgattgctgcatttttt
gttcaagatctcaatgagatgaatgcaattatcagccgctatgccttgattttctgctca
ttgtcggtgatatccattgttgttaatctacttcaacattacaattttgcttacatggga
gagcatctagtaaggcgtatcagagtccaagtacttgaaaagatcttaacctttgaggca
gcatggtttgatgaagaaactaattcaagtggttcactgtgctctcggcttagcaatgag
gcttctcttgtcaaaacccttgttgcagatagaatttccctactgcttcagacagcttct
ggaattataattgcagtgacaatgggccttatagtagcttggaaacttgctcttgtcatg
atcgctgtacagccaactacgatgatatgctactatgccaaaaagatagttctctcaaat
gtgtcaagggacttagcaaaggctcagcaccaaagtactcagattgctatagaagctgtt
tacaaccacaggatggtgacctcttttggatgctcatcaaaggttcttcagctctttgag
catacacaagaggaaccactgaagagagcaaggaagaaatcatgggtggccgggatcacc
actggactgtcaccttgcctttcattcttgtcatgggctcttgacttctggtatggtggg
aaattggcacaatctggggagatctccgcaggtgatgtcttcaaaacattttttgtcttg
gtgagtacaggaaagttgattgctgatgctggcagcatgacatccgacctggctaaggga
gcaaatgcagttgcttcagtgtttgaggtgctagacaggaaatctatctctccacaaaat
tcacaggtggaaaaggacaatcagaagaacaaaatacaaggaaggatagagttcaaaagg
gtagattttgcatatccgacaagaccacaatgccttatcctgcaggattttagcttggat
gtgaaagcaggaacaagtattggtcttgttgggagaagcggctgtggaaaatctaccatc
attggtttgatccagaggttctatgatgttgacagaggggctgtaaaggttgatggtatg
gatgtgagggagatggatatcctttggtatcgaggatttacagcccttgttagccaggag
cctgcaatattttctggtagtgtcagggacaacattgcttttggtaaaccagaagctgat
gaagacgagatcgtggaagctgctaaagctgcaaatgcacatgaattcatatcatctcta
aaggacggatatcatactgactgtggtgagcatggattacaactatcaggagggcaaaag
caacgaattgcaattgcgagggcaataatccggaatccagcaatacttctacttgacgaa
gcaacaagtgctctcgatgcacagtcagagcaagttgtgcaggaagcccttgatagaatc
atgtcaggaaggactacaattgtggtggcacatcgactgaacacaatcaagaatgtagat
tcgattgccttcttaggagagggtaaggtagtggaacgtggtacttatccacacctcatg
agtaagaaaggagcattctacaacctagcggctcttcagaaataa
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integrated database retrieval system
