Oryza glaberrima (African rice): 127775402
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Entry
127775402 CDS
T08853
Name
(RefSeq) tRNA threonylcarbamoyladenosine dehydratase isoform X1
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127775402
Transfer RNA biogenesis [BR:
ogl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
127775402
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Motif
Pfam:
ThiF
Sacchrp_dh_NADP
TrkA_N
Motif
Other DBs
NCBI-GeneID:
127775402
NCBI-ProteinID:
XP_052157604
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Position
6:7876601..7881183
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AA seq
458 aa
AA seq
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MGERARQWLLVAGAGAAVGALSTATVMRILSRSKRREGYVRSLLESNGVASGGAGSSVGT
RVVATSDLLDDEVVSEQLTRNIQFFGMESQKKVTGSFVVVIGLGGVGSHAASMLLRSGVG
RLLLVDFDQVSLSSLNRHAVATRDDVGTPKALCLKKHFSMIYPECQIEAKVQLYDPSCED
EILSGQPDFVLDCIDNIDTKVALLAACVRRGLRVLSAMGAGARADPTRIRVADLRESSND
PLSRAVRYRLKKDHGIEGGIPVVFSLEKPKAKLLPFQASKEEETPSDYQIVPGFRVRIIP
VLGTIPAIFGQVMASYVITQLAKLDFQTEPIVNLDLDHYRILHHRLLEHEELIYGSAEQV
LVDAEEVMYIVKELWHGRSARDQNLKDTGRKMWRSVNELMLVRWDKSKPAGVSNLILLKF
NEADAHESTTLDQIKEEEPEFYNMVSRVLKQAEAEFAL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgggggagagagcgaggcagtggctcctcgtcgccggcgccggcgccgcggttggggcg
ctctccaccgccaccgtcatgaggatcctctcgagatccaagcggagggaggggtacgtg
cgcagcctgctggagtcgaacggcgtcgccagtggtggtgctggatcgagcgttggtact
cgggttgtcgctacttcggatcttcttgatgatgaagtggtctccgaacagctcacaagg
aatatacaattttttggcatggaatctcagaagaaagtgacagggtcatttgttgtagta
attggtcttggaggggttggcagtcatgctgcttcaatgcttcttagatctggtgttggc
cggttgctccttgtggattttgatcaggtttcgctgtcttcgctgaatcggcatgctgtg
gcaacaagagatgacgttggaacacctaaagcattatgcctcaagaagcatttttcgatg
atatatccagagtgtcaaatcgaagcaaaagtgcagttgtatgatccatcatgcgaggat
gaaattctttctggacaaccagactttgttcttgattgtatagataacattgatacgaag
gttgcactccttgcggcttgcgtacgcagaggtttaagggtgctttcagcaatgggggct
ggggctcgagcggacccaaccagaattcgtgttgcagatttgagggaatcaagcaatgat
cctctttctcgggctgtgcggtatcggctgaagaaggaccatggaattgaaggtggaata
ccggtagttttttccttggagaagcccaaggcaaagctacttccttttcaagcttcaaaa
gaagaagaaactccatcagattaccagatcgttccaggattcagggtgcgcattatccca
gtgctgggaactatccctgcaatatttggtcaagttatggcctcatatgtgattactcag
cttgccaaattggattttcaaactgaaccaattgttaacctggatttggatcattaccgt
attcttcaccatcgtcttcttgagcatgaggagctaatatatggttctgctgaacaagtt
ttggtcgatgctgaagaagtaatgtacattgtcaaagaattgtggcatggtcgaagtgct
agagatcaaaatctgaaggacactggccgtaaaatgtggagatctgtcaatgaattaatg
cttgttcggtgggataaatcaaagcctgctggcgtgtcaaacttaatacttctcaagttc
aatgaggcagatgcacatgaatccaccactcttgaccaaataaaggaagaagaacctgaa
ttttacaacatggtttcacgtgttctgaaacaagctgaagcagaatttgctttatga
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