Oryza glaberrima (African rice): 127775419
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Entry
127775419 CDS
T08853
Name
(RefSeq) syntaxin-61
KO
K08500
syntaxin of plants SYP6
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127775419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127775419
Membrane trafficking [BR:
ogl04131
]
SNARE
SNAP-25[C] (Qc)
STX6
127775419
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Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
DUF6366
MCU
Motif
Other DBs
NCBI-GeneID:
127775419
NCBI-ProteinID:
XP_052157627
UniProt:
I1NVH2
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Position
1:complement(38956243..38959257)
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AA seq
234 aa
AA seq
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MSSAQDPFYIVREEIQDSIDKLQTTFHRWEKTPSNTGEHVHLTKELHTSCESIEWQVDEL
EKTILVASRDPAYYGLDEVELSRRRNWIGSARNQVAAVRRSVEKGKSNSTFSAHQDMGTS
RSNHYTAQDNDDFIASESDRQLLLMRQQDEELDELSESVQRIGGVGLTIHEELSGQERIL
NDLSLEMETTSNRLDFVQKRVAMVMKKAGIKGQIMLILFLVVLFIILFVLVFLT
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggcgcaggatccgttctacatcgtccgggaggagatccaggactcgattgat
aagttgcaaactactttccatcgatgggagaaaacaccgtcaaacacaggagaacatgtt
catttgacaaaggagcttcataccagctgtgaaagcattgagtggcaggtggatgagttg
gaaaagacaatcttagttgcatcaagagatccagcgtactatggactggacgaagttgag
ctttctagacgacggaactggattggttctgctcgtaatcaggttgctgcagtcaggaga
tctgttgaaaaggggaagagtaattcaactttctcggcgcaccaagacatgggcacaagc
agaagtaaccactacactgcacaagacaatgatgacttcattgcttcagaatcagataga
cagcttctacttatgaggcagcaggatgaggaacttgatgagcttagcgaaagtgttcaa
aggattggtggtgtagggctaaccatacacgaagagctgtctggacaggaaaggatctta
aacgacctaagcttggagatggaaactacttcaaacagacttgacttcgtgcagaaaaga
gtggcgatggtcatgaaaaaggctggcataaaagggcagattatgctgatcctcttcctt
gtggttctgttcattatacttttcgtgttggtgttcttgacataa
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