Oryza glaberrima (African rice): 127775445
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Entry
127775445 CDS
T08853
Name
(RefSeq) LIMR family protein Os06g0128200
KO
K14617
LMBR1 domain-containing protein 1
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
127775445
04980 Cobalamin transport and metabolism
127775445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127775445
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
127775445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Tetraspanin
DUF7801
Motif
Other DBs
NCBI-GeneID:
127775445
NCBI-ProteinID:
XP_052157651
LinkDB
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Position
6:complement(1578803..1583218)
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AA seq
510 aa
AA seq
DB search
MGDFNVALVIVAAVVSVLVLLVSVYLLINYQHPDDANQAYFPKLVVVLGITVALLSILML
PADVANRQACRRAIYSGACSLTLPMKTLWLAVYIADAVLVFLVIPFAMFYYEGDQDKSVG
KRLTSALLWVAVSAVVCGLILGILYGLVGKVDFTVRHLSSAVETFPNSFTSFSTGQPCIS
TSPKQCAAYTAPANSQTTWTMRATFPEYVVALATIVGSVLFTIFGGVGIACLPLGLIFSF
VRRPKAVITRSQYIKEATELGKKARELKKAAEALHQEERSGKKGRKWRKNVKALGKELVL
LEDDMKALEEMYPQGEQAEATWALTVLGYIGKLLFGAVGLIISIAWVAHIVIYLLIDPPL
SSFLNEIFVKLDGVWGLLGTAAFAFFCFYLLIAVIAGEMMLGLKLVFITIHPMKWGGTLM
NSFLFNVGLILLCSISVIQFCATAFAYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQYG
FVALAILTLFYYAIFGWRKRKPTGRFQLSN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggggacttcaacgtggcgctggtgatcgtggcggcggtggtgagcgtcctcgtcctg
ctcgtcagcgtctacctgctcatcaactaccagcaccccgacgacgccaaccaggcctac
ttccccaagctcgtcgtcgtcctcggcatcaccgtcgccctcctctccatcctcatgctc
cccgccgacgtcgccaaccgccaggcctgccgccgcgccatctacagcggcgcctgctcc
ctcaccctccccatgaagaccctctggctcgccgtctacatcgccgacgccgtcctcgtc
ttcctcgtcatccccttcgccatgttctactacgagggcgaccaggacaagtcagtgggg
aagaggctcacctccgctctcctgtgggtcgccgtctccgcggtggtttgcggcctcatc
ctcggcatcctatacggacttgttggcaaagtggacttcactgtcaggcatctttcttca
gcagttgagacatttccaaattcattcactagtttctcaactggtcaaccttgcatcagt
acatcgcccaagcagtgcgcagcttacactgcacctgctaactctcaaacaacttggaca
atgcgcgctaccttccctgaatatgtggttgctcttgctaccatcgttggatctgttctc
ttcacaatatttggtggtgttggaattgcttgccttccattgggacttatattctcattt
gtccggcgcccaaaagctgtcattacacgctcacaatatataaaggaagcaactgaacta
ggtaagaaggctcgggaattgaagaaagcagctgaagcccttcaccaagaagagagaagt
gggaagaagggcagaaaatggcgcaaaaatgtcaaggcccttgggaaggaattagtactt
ttagaagatgacatgaaggctcttgaagagatgtaccctcaaggagaacaggctgaggct
acctgggctttgacagttcttggttacattggaaaacttttatttggtgctgtcgggtta
attatatcgattgcttgggttgcacatatcgtcatatacttgttgattgaccctcctttg
tcctccttcctgaatgaaatcttcgtaaaattggatggtgtttggggtctgcttgggact
gctgcctttgcattcttctgtttctatctcctcatagcagtgattgctggggaaatgatg
ctgggtttgaaattagttttcatcaccattcacccaatgaaatggggaggaactttgatg
aactcgttcctgtttaatgttggactcatcctactttgctccatcagtgtgattcagttc
tgtgccacagcttttgcttattatgcgcaagcaactgcagctcaggagatctttggccac
acactgcaatctctccgtggaattaagtatctctacaagtacaatgttttccagtatggc
tttgtggctcttgcgatactcacactcttttactatgcaatatttggatggcgaaagagg
aaaccgacaggaagattccagctctcaaattga
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