Oryza glaberrima (African rice): 127775639
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Entry
127775639 CDS
T08853
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogl03009
]
127775639
Enzymes [BR:
ogl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127775639
Ribosome biogenesis [BR:
ogl03009
]
Eukaryotic type
Pre-60S particles
Helicases
127775639
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
127775639
NCBI-ProteinID:
XP_052157880
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All DBs
Position
1:complement(2858524..2862225)
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AA seq
648 aa
AA seq
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MSSSSSSSLAAAAARKRALTEQRFSELSPALSPEVVKALKGGGFRRCTPVQAAAIPLLLS
HKDVAVDAATGSGKTLAFVVPVVEILRRRTSPPKPHEVLGIIISPTRELSSQIYNVAQPF
FATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGTPGKLLDVMERLDTLNYKNLEILIL
DEADRLLDLGFQKQITSIISKLPKLRRTGLFSATQTEAVKELAKAGLRNPVRVEVKTEVK
PTSKDGAQQELGPSKTPLGLRLEYMICEASNKSSQLVDFLVQNTGKKIMVYFATCACVDY
WAIVLPLLDLLKGSPIIPYHGKMKQDPREKALASFSALSSGILVCTDVAARGLDIPHVDL
IVQYDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKEDTYVEFLKRRGVPLTERECSTNA
VDIVPQIRSAALEDRNVMEKGLTAFVSFVRAYKEHHCSYIFSWKDLEIGRLGMEYGLLQI
PSMPEVKHHSLSLEGFTPVKDVDVTKIKYKDKAREKQRQKTLKRKAEELAQRPEIERRRK
APEKPEKPKRKKTGKQRQAVQTKEDMDELANEYRLLKKLKRGVIDEDEYEKLTGFGESDD
EDSSDGGDSDLDERKERGNKVLKKVKQKGKAKGSRRFEGRSKQKSRRR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcctcctcctcctcgttggcggcggcggcggcgcggaagcgcgcgctgacg
gagcagaggttctcggagctgtctcccgcgctgtcgccggaggtggtgaaggccctgaag
ggcggcgggttccggcggtgcacgccggtgcaggcggcggccatcccgctgctgctgtcc
cacaaggacgtggccgtcgacgccgccaccggctccggcaagacgctcgccttcgtcgtc
cccgtcgtcgagatcctccgccgccgcacctcgcctcccaagccccacgaggttcttgga
atcatcatctccccgacgagagagctgtcttcgcagatatacaatgtggcgcagccgttc
ttcgcgacgctgaagggcgtgtcgtccatgctgctggttggtgggttcgacatcaaggca
gagctaaagaaattggaagaagaaggtgcaaacatactggtcggcacaccggggaagctg
ttggacgtaatggagcgcttagacactctgaactacaagaatcttgagattttgatcctg
gatgaagctgataggctgttggatttaggattccagaagcagattacgtcgattatttcg
aagttgccaaagctgaggagaacggggcttttttcggccactcagacggaggctgttaag
gagctggcaaaagcagggttgaggaatcctgtgagggttgaagttaagacagaggtgaag
cccacaagtaaagatggtgctcaacaagagcttggtccatccaaaacaccgttgggtctt
cgattggagtatatgatatgtgaagcatcaaataagtcatcgcaacttgttgatttcctt
gtgcagaacactggaaagaaaataatggtgtacttcgcaacatgtgcttgtgtagattac
tgggctattgttctcccgctgttggacttacttaaaggttctccaataattccttatcat
gggaagatgaagcaggaccctcgtgagaaagctttggcatcattttcagctctctcaagt
ggtattctagtttgcactgatgttgcagcaaggggtcttgacataccacatgttgatctg
attgtgcagtatgatccacctcaagatcccaatgtgttcatacatagagctggccgtact
gcacgttatgatcaagaaggagatgctattgtattcctcttaccgaaggaagatacttat
gttgagttcttgaagaggagaggtgtacccctcactgaaagggagtgttccacaaatgct
gtagatattgtaccacagatcagaagtgctgcattggaagaccgaaatgtcatggagaaa
gggcttacagcttttgtttcgtttgttcgggcatacaaggagcaccactgttcttacatt
ttcagttggaaagaccttgaaattggaaggttgggtatggagtacggcttactccaaatt
ccatctatgccagaagttaagcaccattctctttcattggaagggtttactcctgttaaa
gatgtcgatgttacaaaaatcaagtacaaggataaagctcgagaaaaacaacggcagaag
acactgaaaaggaaagcagaagaactagctcaaaggccagagatagagaggaggaggaaa
gccccggagaagcctgaaaagccaaagcggaagaagacaggcaaacagcgtcaagcagtc
caaaccaaggaggacatggatgagctcgcgaatgaataccggctcctgaagaagctgaag
cggggggtgatcgacgaggacgagtacgagaagctcaccggattcggggaatctgacgat
gaagattcctcggatggcggcgactctgacctggacgagagaaaggagaggggcaacaag
gtgctgaagaaagtcaagcagaaagggaaggcaaaagggtctaggagatttgaagggagg
agcaaacagaagagtaggagaagatga
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