Oryza glaberrima (African rice): 127775661
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Entry
127775661 CDS
T08853
Name
(RefSeq) heat stress transcription factor C-2b
KO
K09419
heat shock transcription factor, other eukaryote
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127775661
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
127775661
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
127775661
NCBI-ProteinID:
XP_052157896
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All DBs
Position
6:complement(20296396..20298916)
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AA seq
278 aa
AA seq
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MAAAAGGGAAPFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTLLPAHFKHNNF
SSFVRQLNTYGFRKVDPDRWEFAHASFLRGQTHLLRNIVRRGSAAAGGGGGGGGGKRRDA
SADGGGGGGDEDMTMVATEVVRLKQEQRTIDDRVAAMWRRVQETERRPKQMLAFLLKVVG
DRDKLHRLVGGGGNGNGAATAAAADNGFADAARAGCGEKRARLLLDGDNTGAFGPDAVDF
AGFYTGADMFPDVAVDAAAAAAGGSAGCSFAFGVDSGY
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgggaggaggggcggcgccgttcgtgtggaagacgtacaggatggtg
gaggaccccgggacggacggggtgatcgggtgggggaaagggaacaacagcttcgtcgtc
gccgaccccttcgtcttctcccagaccctgctccccgcccacttcaagcacaacaacttc
tccagcttcgtccgccagctcaacacctatggtttccgcaaggtggatccggatcggtgg
gagttcgcccacgcgtcgttcctgcgtggccagacccacctcctgcgcaacatcgtccgc
cgcggcagcgcggccgccggcgggggaggcggcggcggcggcggcaagcgcagggacgcg
tcggcggacggcggcggcggcggcggcgatgaggacatgacgatggtggcgacggaggtg
gtccggctgaagcaggagcagcgcaccatcgacgacagggtggccgcgatgtggcgccgc
gtgcaggagacggagcggaggcccaagcagatgctcgccttcctcctcaaggtcgtcggc
gaccgcgacaagctgcaccgcctcgtcggcggcggcggcaacggcaacggcgccgctacc
gccgccgccgccgacaatgggttcgcggacgccgcgcgggcggggtgcggcgagaagcgc
gcgaggctgctgctcgacggcgacaacaccggcgcgttcggcccggacgccgtcgacttc
gccgggttctacaccggcgccgacatgttccccgacgttgccgtcgatgccgccgccgcc
gccgccggcgggtcagccggctgctcgttcgctttcggagtggacagcggctactga
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