KEGG   Oryza glaberrima (African rice): 127776183
Entry
127776183         CDS       T08853                                 
Name
(RefSeq) uncharacterized protein LOC127776183
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03022  Basal transcription factors
ogl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    127776183
  09124 Replication and repair
   03420 Nucleotide excision repair
    127776183
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogl03021]
    127776183
   03400 DNA repair and recombination proteins [BR:ogl03400]
    127776183
Transcription machinery [BR:ogl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     127776183
DNA repair and recombination proteins [BR:ogl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     127776183
SSDB
Motif
Pfam: MAT1 NAD_binding_9
Other DBs
NCBI-GeneID: 127776183
NCBI-ProteinID: XP_052158495
UniProt: I1PZX2
LinkDB
Position
6:3545652..3547827
AA seq 195 aa
MVVASGGGRNAWAKEMTIRRRITSIFNKTREHFPSLKDYNDYLEEVEDMTFNLIEGIDVE
VIEAKIARYQQENAEQIYLSRAKRAEDLAAALKASRMNPGKAGANDTAAGSSQGISSGAG
VQEGQYAPAAVPGGLAQPRPTGMAPQPIGGSSVPLQGDDEETMRLRAERGARAGGWSIEM
CKRRALQEAFSTIFV
NT seq 588 nt   +upstreamnt  +downstreamnt
atggtggtggcatccggcggagggcggaacgcgtgggcgaaggagatgaccatccgccgc
aggattaccagcatattcaacaagacgcgggagcattttccgtccctgaaagattacaac
gactatcttgaggaagtcgaggatatgactttcaacctgatcgaggggatagatgtcgag
gtgattgaagctaaaattgccagatatcaacaggaaaatgctgaacagatatatttgtcc
cgggctaaaagggccgaagatcttgctgccgcacttaaagcaagcagaatgaaccctggc
aaggctggtgccaatgacacggctgctggaagctctcagggcattagtagtggcgcggga
gttcaggaaggccagtatgcgcctgctgctgttcccggtgggctagctcagcctcggcca
acagggatggcccctcaaccgatcggcggttcatcggttcctcttcaaggagatgatgag
gagaccatgaggctacgtgcggagagaggggctcgagctggtggatggtccatcgaaatg
tgcaagagaagagcattgcaggaagcgttcagtaccatattcgtctga

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