Oryza glaberrima (African rice): 127776253
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Entry
127776253 CDS
T08853
Name
(RefSeq) transcription factor MYB119-like
KO
K09422
transcription factor MYB, plant
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127776253
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
127776253
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SLIDE
DUF6581
Motif
Other DBs
NCBI-GeneID:
127776253
NCBI-ProteinID:
XP_052158580
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Position
6:3198905..3202488
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AA seq
443 aa
AA seq
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MDFSCFQPHSGGCDVMPFDSYVQHNGHQEIHLVDHPFNNVTDGHEYYSPSAGGSFLPFAT
YYDLGHEYYHQGGEKDAVVVDRASPTIRKASPHLPLFTPKSEVSHLIGGGVVGSYKAFEM
NSRLIRRKRASGKSLKKANVVKGQWTLEEDRKLVKLVEQFGLRKWSHIAQILPGRVGKQC
RERWHNHLRPNIKKDTWSEEEDIVLIQTHKEVGNKWAEIAKHLPGRTENSIKNHWNATKR
RQFARRRSRASSKNPKSGTLLQNYIKSLGIGPIKSSVRQAPSESTVVSSSSPASTQKLSE
VNGKIWPDSNPSNQMDTQGILTMDENTYIQTNSCEELLVSIYDDLCLDMCDHLFETKDEA
PYQVYNIDDDVDMNYIFNHIEYANKIGNEIDMEMAWDDDVLQDDESAGSSPLETPAGLAQ
INTVHVKEEMDLIEMVTRTQSCG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagttgcttccagccacattcaggaggctgtgatgtcatgccatttgattcc
tatgtgcagcacaatggccatcaggagatccatcttgttgatcatccattcaacaatgtc
actgacggccatgaatactattctccatctgctggtggatcctttcttccctttgcaacc
tactatgatcttggccatgagtactaccatcaaggaggagaaaaggatgctgtcgtcgtc
gatcgggcttcgccgactattcgtaaagcttcgcctcacctgcctctcttcacacctaaa
tctgaggtttctcacctcataggaggtggtgtcgttgggtcatacaaggcatttgagatg
aattctaggcttatccggcgcaaaagggcttcgggtaagtctctgaagaaggctaatgtt
gtcaaaggccagtggacattggaagaagacaggaagcttgtgaaattagtcgaacagttt
ggactaaggaagtggtctcacattgctcaaattcttcctggaagagttggcaaacagtgc
agagaaagatggcacaaccatttgaggcctaacatcaagaaagatacatggagtgaagag
gaagacatagttctaatccaaacacacaaagaagtgggtaacaaatgggcagagatagct
aaacacctgcctggtagaacagaaaactccatcaagaatcactggaatgcaacaaagaga
aggcaattcgcacggaggaggagccgcgctagctccaagaaccccaaatctggaaccctt
ctgcaaaactacatcaaaagccttggaattggtccaatcaagtcaagtgttcgtcaagct
ccatcagaatctactgtagtgtcatcttcctcaccggcatccacacaaaaattatcagag
gtgaatggtaagatctggccagattccaacccatccaaccaaatggacacccagggaata
ctcaccatggatgagaacacctacatccagactaactcttgtgaagaactcctggtctct
atctatgatgatttatgccttgatatgtgtgatcatttgttcgaaacaaaggacgaggcg
ccgtaccaggtttacaacatagatgatgatgttgacatgaactacatcttcaaccatatt
gaatatgctaacaagattggcaatgagatagatatggaaatggcatgggacgatgatgtc
ctccaagacgatgaatcagccggctcatcaccattggagacaccggcaggtctagcacaa
atcaataccgtgcatgtgaaggaggagatggatctaattgagatggtcacacgcacacaa
tcttgtggctag
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