Oryza glaberrima (African rice): 127776388
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Entry
127776388 CDS
T08853
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogl01002
]
127776388
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127776388
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127776388
Peptidases and inhibitors [BR:
ogl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127776388
Ubiquitin system [BR:
ogl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127776388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Peptidase_C98
Dicty_REP
DUF2175
Motif
Other DBs
NCBI-GeneID:
127776388
NCBI-ProteinID:
XP_052158702
UniProt:
I1Q034
LinkDB
All DBs
Position
6:complement(4119363..4124680)
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AA seq
940 aa
AA seq
DB search
MAEVEVAAAAAAAEGVLHRRIEFHLARRSHSVVAVGGGGFRMETLNPDAGDRAAAGAAQG
MGVAAGGEGEARRAEKGEVVGGGLDPELSVARIYLGRIGAGLQNLGNTCYLNSVLQCLTY
TEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQSTGKIVTPSQIVKNLRCISRSFR
NSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHC
SNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKA
PYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISDSKGADFKYSLYGVLVHAGWNTQ
SGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFYVRDRVGNPTPRKDNITANM
PAKRTIPEKISGLSGMIQSGVIEAKLNGSSSPYGDKRLHGISNGNSIKTSREHYLKKDGK
TEAPKASENNGLASTQKASAPQIDGATLSAQSKQITSTGHREVSSSDRSASLTHVIVNQA
VAMVPSQELQPKVDGLTDTSSLGNGNAILSERNKQTSQHQNPFSMPASHGKDTGAGLAAQ
TFPTKDAIVSNGVVPSSRDPISSEKVCGLQKSIKQDDKTVKELPISENNIVSGLEQVNAR
KQTSSEVSMKVAAADSCNSNTPKRVDLKSKKLVRYPVMNMWLGPRQVMLGSLKVQKKKKC
NRTRRRSVVCEDMANATCSGNNTSEQQASTSTTTSSETVQCTPRGRKRAYDSDSPKNNNQ
KQNKQDVVGADTGSGELNMDKRNVISETAASAELPKLGPGSSANQEHSRNNVHAKLGVPR
HFTVLTRDLAEVTVPCWDDVAVSNAEARESKHSESKSIGYVLDEWDEEYDRGKTKKIRNS
KEDYGGPNPFQEEANYISQRNMKQRTYQPKSWKKHAHVRR
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggttgaggtggcggcggcggcggcggcggcggagggggtgctgcacaggagg
atcgagttccacctcgcgaggaggtcgcactcggtggtggcggtcgggggaggcgggttc
cggatggagacgctgaaccccgacgcgggtgacagggcggcggcgggggcggcgcagggg
atgggggtggcggcggggggcgagggggaggcgaggagggcggagaagggggaggtggtc
ggcggtgggctggatccggagctcagcgtcgccaggatctacctcgggagaattggtgct
ggcctgcaaaatcttgggaacacttgctacctgaactcggtgctgcaatgcttgacgtac
acagaaccattcgcggcctatttgcagagcgggaagcacaagtcttcatgtcgtactgct
ggattttgtgcactatgtgctcttcaaaaccacgttaagactgctctacagtcaactgga
aaaatagtgacgccatcacagattgtcaagaacttgcgctgcatctcccgtagtttccgc
aattcaaggcaggaggatgcacatgagttaatggttaatttacttgaatccatgcataaa
tgttgtctaccttctggagtaccaagtgagtctcctagtgcatatgagaagagcttagtt
cacaaaatatttggtggccgcctaagaagtcaggtgaaatgcacacagtgctcacattgc
tccaacaaatttgatcctttcttggatctcagccttgatattggtaaggccacgtctctg
gtgagggcacttcaaaatttcactgcggaagagctcttagatgggggagaaaagcaatat
cagtgccaacgctgcaggaaaaaggttgtagcaaagaaaaagtttacaattgataaggcg
ccatatgttctgacaattcatctgaagcgctttagccctttcaacccccgtgaaaagatt
gacaaaaaagttgattttcagccaatgctagacttgaagccatttattagcgactctaaa
ggcgcagattttaaatacagcctttatggtgttttggttcatgctggttggaacactcag
tcaggccattattattgcttcgttcgaacttccagtggaatgtggcacaaccttgatgat
aaccaggtacgccaagtccgtgaggcagatgtattgagacagaaagcatatatgttattt
tatgtacgtgacagagttgggaatccaactccacgcaaggataatatcactgctaatatg
ccagccaagagaacaatacctgaaaagatctcaggtctgagtggtatgatccagagcggc
gtaattgaagcaaaattgaatggttcctcgtctccttatggcgataagaggttgcacggc
ataagcaatgggaactcaatcaagacttcaagagagcattatttgaagaaagatggcaaa
actgaagctcctaaagcctctgaaaacaatggcctggcttccacacagaaagcttctgca
cctcaaattgatggtgctaccttatctgctcaatctaagcaaattacttcaactggtcac
agagaggtatcttcatcagatcgatctgcatctcttacacatgtgattgtgaaccaagca
gtggccatggttccgtcgcaggaattgcaaccaaaggttgatggcttaaccgatacctct
tccctgggcaatggcaatgcgatattgtctgagcgaaataaacaaacatcccagcatcaa
aatccattttctatgccagcttcccatggaaaggacacaggggcagggcttgctgcacaa
actttcccaactaaggatgctattgtttcaaatggtgttgtacctagtagcagggatcca
atttccagtgagaaggtgtgtggcttgcaaaaatccatcaagcaagatgacaaaacggtg
aaagaacttcctataagcgagaacaatatagtatcaggacttgaacaagtcaacgccaga
aaacagactagctctgaagtttccatgaaggtagctgcagctgattcgtgcaatagcaac
acacctaaaagggtggatttgaagtcaaagaaacttgtgagatatccagtcatgaacatg
tggcttgggcccagacaagttatgctaggttcactaaaggtacaaaagaaaaagaaatgc
aatagaactagaagacggtctgtagtttgtgaggacatggccaatgccacttgttcaggt
aacaacacaagcgagcagcaggcatcaacatcaacaacaacgtcgtctgaaactgtgcaa
tgtactcccagagggcggaaacgtgcctatgatagtgacagtcctaaaaataataaccag
aagcaaaacaagcaagacgttgttggagccgatactggtagtggtgaacttaacatggat
aagagaaatgttattagtgaaaccgctgctagtgctgagcttccgaagctgggtccaggc
tcttctgcaaatcaggaacattcaaggaacaatgttcatgcaaaattgggagttccccgg
cattttactgttctgacaagggacttggctgaagttactgttccatgctgggatgatgtt
gctgtgtcaaatgctgaggcaagagagtcaaaacattcagaaagcaagagcattggatat
gtgttagatgaatgggacgaggagtatgaccgtggaaagaccaagaaaatcagaaattca
aaggaagactacggtggaccaaaccccttccaggaggaggccaactacatctcacagaga
aacatgaaacagaggacctatcaacccaaatcctggaagaaacatgcccatgttagaaga
tga
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