Oryza glaberrima (African rice): 127776420
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Entry
127776420 CDS
T08853
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127776420
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogl01009
]
127776420
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127776420
Protein phosphatases and associated proteins [BR:
ogl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127776420
Spliceosome [BR:
ogl03041
]
Common components
Common spliceosomal components
SR proteins
127776420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
127776420
NCBI-ProteinID:
XP_052158738
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All DBs
Position
6:28811013..28815749
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AA seq
430 aa
AA seq
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MTELAKSLGGRQPTSRSHSPAIRVPSRGIASPSSSFFLLRREGFFLLPLLFPSSHVGQGG
GGRRWHIWAVQCPNLNGPDSVWIWWAWASRVHGPTILPIAGGVYKNPKREHQRSRLEAET
EREKQHPNPSPPLSSRTRASAPPPGAPPPPPPHPPRAMAETPERRRYSGSPSPYRGNPKS
RSRSRSPAARSQSRSPVPDPRSQARSRSRSREREPDAVNHGNTLYVTGLSSRVTERELKD
YFSKEGRVTSCHVVLEPHTRVSRGFAFVTMDTVEDAERCIKYLNQSVMEGRNITVEKSRR
GRPRTPTPGSYLGHRYDRREPRGRYRSRGGGYGRDEYYGNSYRRSPPPMYPSYRDTRDYP
PYRDTRDYSPHRDARDYYDGKGGRGYSPHRSPPYGGGRARRERSRSLPYSPYRMPERGYG
RRAGGGGYDR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgacggagttggcgaagagcttgggcgggaggcagccgacctcgcgctcccacagcccc
gccatccgcgtcccctcccgcggcatcgcctcgccttcttcttccttcttcctcctccgc
cgcgagggtttcttcctcctccctctcctcttcccttcttcgcatgtcggccaaggggga
ggtggaaggcggtggcacatctgggccgtccaatgtcccaacctcaacggcccagattcc
gtgtggatctggtgggcctgggcctcacgcgttcatggcccaactattctccccatcgcg
ggcggcgtgtacaaaaacccaaagagagagcatcagcggagcaggttggaagcggagacc
gagagagagaagcagcacccaaaccctagccctcccctctcctcccgcacgcgcgcgtcg
gcgccaccaccgggagctccgccgccgccgccgcctcatccgccccgtgccatggcggag
acccccgagcgcaggaggtactcagggtccccctctccttacaggggaaacccaaaatca
aggtcaagatcacgatcacctgcagctcgatcccagtctaggtctccagtccctgaccct
agatctcaggcaaggtcaagatcaagaagccgcgagagggagcctgatgctgtaaatcat
ggaaatacactgtatgtgactggactctcttctcgagtgactgaaagagaacttaaagat
tacttctctaaagaaggaagggtgactagttgccatgttgtccttgaaccccatacacgt
gtttctcgtggatttgcttttgtcaccatggacactgttgaagatgctgaacgctgtatc
aagtatcttaaccagtctgtaatggaaggccggaacatcacagttgaaaagtcacgtcga
ggtcgcccaaggacgccaactcctggaagctatcttggtcatcgatatgaccgtagagag
ccacgtgggagataccgcagcagaggaggtggctatggccgtgatgagtactacggcaat
agctaccgcaggtctccgcctccaatgtacccatcctacagggacacaagggactaccct
ccatacagggacacaagggactactccccccacagggatgctcgagattactacgacgga
aagggaggcaggggatactccccacatagatctcctccttatggcggtggcagggcccgg
agggagcgatctagatcattgccgtattctccctaccggatgcctgagagaggctatgga
cgccgagccggtggtggtggctatgacaggtaa
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