Oryza glaberrima (African rice): 127776441
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Entry
127776441 CDS
T08853
Name
(RefSeq) coatomer subunit beta'-1 isoform X1
KO
K17302
coatomer subunit beta'
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127776441
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127776441
Membrane trafficking [BR:
ogl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
127776441
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127776441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
NBCH_WD40
PEP5_VPS11_N
Beta-prop_HPS5
TPR_1
WD40_RFWD3
TPR_GEMI5
Beta-prop_DCAF12
Clathrin
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
TPR_IF140-IFT172
HEAT_GCN1
DUF5105
Motif
Other DBs
NCBI-GeneID:
127776441
NCBI-ProteinID:
XP_052158764
UniProt:
I1PZH1
LinkDB
All DBs
Position
6:complement(2417005..2425785)
Genome browser
AA seq
911 aa
AA seq
DB search
MPLRLEIKRKFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQSQTMVKSFEVSELPV
RSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDANTFASASLDRTTKIWSLGSPDPNFT
LDGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNISAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKMG
REVPVASMDTSGKIIWAKHNEIQTVNIKTVGAGFEVTDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEFIIYTALAWRNRSFGSALEFVWSSEGEYAIRESTSRIKIFSKSFQ
EKKTIRPTFSAERIFGGILLAMCSSDFICFYDWADCRLIRRIDENVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVASYLESGKPVDEEGVEDAFELLHEVNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDIERANDILPSIPKAQYNNVAHFLESRGMLEEALEIATDADYRFDLAVQLGKLEVAKA
IAMEAQSESKWKQLGELAMSTGKLDMAEECLVQAKDLSGLLLLYSSLGDAEGIEKLASQA
KEHGKNNVAFLCLFMLGKLEDCIQLLIDSNRIPEAALMARSYLPSKVSEIVAIWRNDLSK
VNPKAAESLADPSEYPNLFEDWQVALTVEKNVASRRVHYPPADEYLNHAEKSDMTLVEAF
KRMQVIEDEETEDALDENGEPDEEVLEENKVEESTDEAVEVDADEPEETVLVNGKEGEEQ
WGTNNEGTSSA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcaggttggagatcaagaggaagtttgcgcaacggtcggagagggtcaagtcg
gtggatctgcaccccacggagccatggatcctgtcgagtctttactccgggagcgtgtgc
atctgggactatcagtcgcagacaatggtgaagtcatttgaagtttcagaattgccagtg
cggtcagcaaaatttatttcacggaaacaatgggttgtagctggtgcagacgatatgttc
attcgtgtctacaactacaacacgatggacaaagttaaggtttttgaggctcatactgat
tatattagatgtgttgcagtccatccaacacttccatatgtgctttcatcatctgatgac
atgttgataaaattgtgggactgggataaagggtggatgtgcactcaaatctttgaggga
cattcacactacgtgatgcaagttactttcaatccaaaggatgctaacacttttgcaagt
gcatctcttgaccgaactacaaagatatggagtttgggttctccggatccaaatttcaca
ctcgatggacatcaaaagggtgtgaactgtgttgactacttcactggtggtgacaggccc
tatttgatcactggttctgatgactccactgcaaaggtctgggattaccaaacgaagagc
tgtgttcagacacttgaaggacatacacacaacatttctgctgtttgtttccatcctgag
cttcctataatcattactggatctgaagatggcacagttcgcatatggcattcgacaact
tacagacttgagaacacgctaaactatggtcttgaacgagtctgggctgttggatacatg
aagggttcaagaaggatggtaattggttatgatgagggaactataatgataaaaatggga
cgtgaagtacctgtggcaagcatggataccagtggaaaaatcatttgggcaaaacataac
gagatacagactgtgaacatcaagactgttggtgcaggctttgaggttacagatggggaa
agattgccattggctgttaaagaattaggaagttgtgatctttacccacagagcttaaag
cataacccaaatggaagatttgtcgtagtttgtggagatggtgaattcataatttatact
gcattggcttggaggaataggtcatttggatctgcattggagtttgtttggtcatcagaa
ggagagtatgctatcagggaaagtacatcaagaataaagattttcagtaaatcatttcag
gagaagaaaactattcgccctacattttcagctgaacgtatttttggtggaatattattg
gcgatgtgttccagtgatttcatttgcttttatgactgggctgactgtagactaatacgc
cgcattgatgagaatgtcaaaaacctttattgggctgatagcggtgacctagttgcaata
gcaagtgatacatcattctacatactgaagtacaacagagatgtcgttgcgtcttatcta
gaatctggaaaacctgtggatgaggaaggcgttgaagatgcttttgagctgcttcatgag
gttaatgagcgagtgcggacagggatctgggttggagactgctttatttataacaattca
tcatggcgcctgaactattgtgttggtggcgaggtcaccacgatgtatcacttggatcgc
cctatgtacttgttgggatatctagcgaatcaaagccgagtttatcttattgacaaggaa
ttcaatgtcatggggtacacattacttcttagtttgattgagtacaagacacttgtgatg
cgtggggatattgaacgtgcaaatgatattttaccatccataccaaaggcgcaatataat
aatgttgctcatttcttggagtcaagaggtatgctggaggaagcacttgagatagctact
gatgctgattacaggtttgacctagctgtgcaacttggaaaattagaagttgcaaaggct
atcgcgatggaagcgcaaagtgaatctaagtggaagcagttgggtgaactggctatgtcc
acaggcaagctagatatggcggaagagtgccttgtgcaagcgaaggacttaagtggcctg
ttgctactatattcatctcttggagatgctgagggaatcgagaagcttgcttctcaagca
aaggagcatggcaaaaacaatgttgctttcctctgtctctttatgcttggtaaattggaa
gattgcatacaattgctgatagacagcaatcgtatacctgaagctgcgttaatggcacgt
tcttatcttcccagcaaagtttctgagatagtagcaatatggagaaatgacctcagtaaa
gttaatccaaaagctgcagagtctctggcagatccttctgagtatccaaatttatttgaa
gactggcaggttgcacttactgtagaaaagaatgttgcttctcggagggtccattatcct
cctgctgatgagtacttgaaccatgctgaaaagtcagacatgactcttgtggaagctttc
aaaaggatgcaggtcattgaagatgaggaaacagaagatgcactagatgaaaatggagag
cccgatgaagaggttttggaagagaacaaagtggaggagagcacagatgaagctgtcgaa
gttgatgctgatgagcctgaagagaccgttcttgtaaatgggaaagagggtgaggaacag
tggggtacgaacaatgaaggaacttcgtcagcctaa
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