Oryza glaberrima (African rice): 127776442
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Entry
127776442 CDS
T08853
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127776442
Membrane trafficking [BR:
ogl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127776442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
127776442
NCBI-ProteinID:
XP_052158769
LinkDB
All DBs
Position
6:complement(476939..483858)
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AA seq
1483 aa
AA seq
DB search
MASASDSDDADADFFDKLVDDDDADTNRRLASDLTPPPSRPEPDQAAPPPPPQPHTAPPP
PPPNAEPEAPPPPQLEVKAPAATLPPNPEAASPGSAKDVHTAVKQVQWSAFATNSGVGGD
DPFGEFMGDDAFFGGNNTHTMTGDQPIQASLVPPTTSTIGSMDHQFSNQVDNIADSQPGW
PATAAEFMDHNTSVQSDSTAAAAVDSTSTDPKYFESLYPGWKYDEATQQWYQVDSSYTAQ
GNADNLGALPVVGGDNVHQQQQQQQQQFTVSYLHDSSQAGLETIAEEGSTMATSWTPNES
NTGAVEYPSNMVFYAEYPGWYFDTNTQQWLSLESYQQGGVQAETTAAASAGYAGTGHNVA
QTSDSYTGDYSHQGQQQHGSLGDNSLSDSFYGSNQHTENQTAQQANVESLESSKYYHADI
NTYAHSTSQYASSEDHQASYKGFGSSTSHQSVYKGFEPSVGHQSTFTSHHSGYNGSESST
VQQAAHQGFKPSTGNQNYKGFEPYSGHQLGYKGYDYSTGQSGHQEFGPSTDSQANHVAYQ
QLPSHYSSFDGAAKPQDSVPTANMPQMQTRADSDGCMNLPNNYLSTGSSVNFAQQQFIGS
NALPQQFGYSSHEQRSSAGRPPHALVTFGFGGKLVVVRETISMSTNFDSGNQGNPCGTVS
ILNVSEIVSDRVDHPSIPSGSALSYFHALCRQPIPGPLVGGSAAAKDVNKWLDEITGGYD
SSIREFQGGDDQKLLISLLKILCQHYGKLRSPFGSDPSQEGIDGPEMAVTKLFSSCKSSG
AHKGEYGAIVHCMKNIPSENQIQATAKEVQNLLVSGRRKEALQYAQEGQLWGPALILALQ
LGDKFYVDTVKKMAYHHFVSGSPLRTLCLLIAGQPADVFNAENPVDGNYGILHIPQRPVE
AVNSKSMLDDWQENLAIITANRTKGDDLVITHLGDCLWKEKNEVAAAHSCYLAAELNIES
YAESSRMCLIGADHLRCPRTFTSPEAIQRTEVYEYAKVLGNSQYILLPFQPYKLIYAYML
VEVGKVSDSLRYCQACLKVLKASGRAPELEAWKQLFSSLEERIRTYQQGGYGTNLAPAKL
VGKLFTSLDKSLSRMMGTQPSALSPVPQGSLTERDSYSAPAATNFVNNQPVMAMSSLMSS
VSEQSMSEMSGNTGPDRKVTHNRSVSEPDFGRTPNQGAGLDNAQSTSGSGSSRFGWLLQK
TMGLVSRSHHQAKLGEQNKFYYDEKLKRWVEEGADIPAEEPPLPPPPTKALFQNGIPDQS
SNGPGSVSYTANGFSEARPLNPSGPSSGMPPMPPSQNQFSARGRMGVRSRYVDTFNKGGA
SATGPSYNKPATPSMNPLSGATFFVPTPATVASEQIPDPTVNVHQDQPSSTIALRESSAS
PPPSVQSIPVQSNIQRYPSMDNIMTPSGSGNGSSFSRSRAASWSGAYSEQLSGNAVSRSP
DGQRTMMQSPLIPGQKQSHSRSSSNSSLQFNNGLGEDLHEVEL
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcttccgattcggacgacgccgacgccgatttcttcgacaagctcgtcgac
gacgatgacgccgataccaaccgtcgcctcgcctccgacctcacgccgccgccttctcga
ccggagccggaccaggccgcgcctcctcctccacctcagcctcacaccgccccgccgccc
cctcctcctaatgcggaacccgaggcccctcctcctcctcagctggaggttaaggccccc
gccgccacactgccaccaaacccagaggccgcctcgccgggctccgcaaaggacgtccat
accgccgtcaagcaggtgcagtggagcgccttcgccaccaacagcggtgtcggtggggat
gatccttttggagaattcatgggcgacgatgcattttttggaggtaataatactcatacc
atgacgggtgatcagcccatacaggcttcacttgtacctcctaccactagtaccattggc
tccatggatcaccaattctccaatcaagtggataacatcgccgattcacagcccggatgg
cctgctactgctgccgagtttatggatcacaacactagcgtacagtcagactcaaccgcc
gccgctgctgtcgactccacatccaccgatcccaagtattttgagagcctctaccctggc
tggaagtacgatgaagcgacgcaacagtggtatcaggtggattcttcttacactgcacag
ggtaatgctgacaatcttggtgctttaccggtcgttgggggtgataatgttcaccagcag
caacagcagcagcagcagcagttcaccgtttcttacttgcacgactcttcacaggcgggg
ttggagaccatcgcagaggagggaagcaccatggctacaagctggaccccgaatgagagc
aatacaggagccgtggagtacccgtccaacatggtgttctacgctgaatacccaggatgg
tactttgacaccaatactcagcagtggctctcactggagtcgtatcagcaaggtggtgtg
caggcagaaactactgcagcagcctcagctggatatgcaggaacaggccataatgtagct
caaaccagtgattcttacacaggtgactatagccatcagggacaacagcaacatggctcg
ttgggtgataacagcttgtcggatagtttttatggttccaaccagcacactgagaatcaa
actgctcagcaggcaaatgtcgagtcattggaatcttctaagtattatcatgctgatatc
aacacatatgcgcattctacaagtcagtacgctagtagtgaggatcaccaggcgagttac
aagggattcggatcttccactagtcatcagagtgtttacaagggttttgaaccatctgta
ggtcatcaaagtacttttaccagccatcatagtgggtacaatggctctgaatcttccaca
gtccaacaggctgctcaccagggatttaaaccttctacaggcaaccagaattataagggg
tttgagccttattcaggtcaccagttgggatataagggatatgattattctacgggccag
agtggccaccaggaatttggaccttctacagatagtcaagctaaccatgtggcataccaa
cagttaccaagccattacagcagcttcgatggtgctgctaagccacaagactctgttcca
acagcaaacatgccccagatgcaaacacgtgctgattctgatggatgcatgaatttgcca
aataactatttgagcactggaagctctgtaaattttgcgcagcagcaattcatcggttcc
aatgctttacctcaacaatttggttattcctcccatgagcagaggtcatcagctggacgc
ccaccacatgctttggttacattcggatttggggggaagcttgtagttgtgcgagagacc
atttcaatgtccacaaactttgatagtgggaatcagggaaatccatgtggcacagtgtca
attcttaatgtgtcagagattgtttctgatagagttgatcatccaagtatccctagtggt
agcgcacttagttacttccatgcattgtgtcgtcaacctattcctggcccccttgttggt
ggaagtgctgcagcaaaggatgtgaacaagtggcttgatgagatcaccggaggctatgat
tcctctatcagggagttccagggaggagatgatcagaagttgctcatttcactgcttaaa
atattgtgccaacactatggaaagctccgttcaccttttgggtctgatccatcgcaggag
ggtatagatggtccagagatggcagtgacaaaacttttctcatcttgtaagagtagtggt
gctcataagggagagtatggagccattgtccattgcatgaaaaacattccgtcagaaaac
cagatccaggctactgctaaggaggttcaaaatctcctagtttctggtagaaggaaagag
gctcttcagtatgctcaggaaggtcagctttggggacccgcattaatccttgctttacaa
cttggtgataagttttatgtggatactgtgaagaaaatggcttaccaccattttgtatct
ggatcacctttgaggacattgtgccttcttattgcgggacagcctgcagatgttttcaat
gctgagaaccctgttgatggcaattatggtattttgcatataccccaacggccggtggag
gctgtgaattctaagagcatgctggatgattggcaagagaatttggctattataactgca
aacaggacgaaaggtgatgatcttgtaattacgcaccttggagattgcctctggaaagag
aaaaatgaggtggcagctgctcattcatgctatttagctgcggaactaaatatcgagtcg
tatgcagaaagttcaagaatgtgtctaattggtgcagaccatttgagatgtcctcgtaca
tttaccagccctgaagctatccagcgaacagaggtgtatgaatatgcaaaagttcttggt
aattctcagtacatcctcttgccatttcaaccatataagctgatatatgcatacatgctt
gtggaggttgggaaggtttctgattcattaaggtattgtcaagcatgcttgaaggtgctg
aaagcatctggccgtgcacctgaattagaggcatggaagcagttgttttcatccctagag
gagcggatacgcacctaccagcagggtggttatggtacaaatctagcccctgcaaagctt
gttggaaaacttttcacatcacttgataaatctttgtcccgcatgatgggtacacaacct
tcagcgttgtcaccagtgccacagggctccttaaccgaaagagattcctattcggctcct
gcagctacaaattttgtgaataatcagccagtgatggctatgtcttctttgatgtcttct
gtttcagagcaatctatgagtgaaatgtcaggaaatactggccctgacaggaaagtcaca
cataacagaagtgtctctgaaccagactttggcagaacccccaaccagggtgcaggatta
gataatgcacaaagcacatcaggttcaggtagttcacgttttggatggttgctgcagaag
acaatgggacttgtttcaagatctcatcatcaggcgaagctgggggaacaaaacaagttc
tactatgacgagaagctgaagcggtgggtggaagaaggtgctgacatacctgctgaggag
cctccccttcccccacctccaacaaaggccttgttccagaacggtattccagatcagagt
tcgaatggcccaggcagtgtaagttatactgctaatggattttcagaagcaaggcctttg
aatccttctgggcctagttcagggatgccaccaatgccacctagccagaaccaattctca
gcacgtggacggatgggtgttagatcaagatacgtcgacacatttaacaagggtggtgca
agtgccactggaccgtcatataataaaccagccaccccatccatgaatccactgtctggt
gccactttctttgtgccaactccagctactgttgcgtcagagcagatccctgacccaaca
gtcaatgttcatcaggatcaaccatcttccacgatagctctgcgggaatcctcggcttcg
ccaccaccatcagtacaatcaataccagttcaatcaaatattcagcgatatccaagtatg
gacaacatcatgaccccatctggcagtgggaatggcagctcattctcaaggtcacgagca
gcatcatggagtggagcatattcagagcagttgagcggcaatgctgtttcgagatcacca
gatggacaacggaccatgatgcagtctccgttgattcctggacagaaacaatcccacagc
cgttccagtagtaactcatcacttcaattcaacaatggcctgggcgaggatcttcacgag
gtagagctctga
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integrated database retrieval system
