Oryza glaberrima (African rice): 127776446
Help
Entry
127776446 CDS
T08853
Name
(RefSeq) myosin-11-like isoform X1
KO
K10357
myosin V
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127776446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127776446
04131 Membrane trafficking [BR:
ogl04131
]
127776446
03029 Mitochondrial biogenesis [BR:
ogl03029
]
127776446
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogl04812
]
127776446
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127776446
mRNA cycle factors
P-body specific factors
127776446
Membrane trafficking [BR:
ogl04131
]
Others
Actin-binding proteins
Myosins
127776446
Mitochondrial biogenesis [BR:
ogl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127776446
Cytoskeleton proteins [BR:
ogl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127776446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
nSTAND3
AAA_16
AAA_22
CbiA
SH3_VIII-1_N
Flp1_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
127776446
NCBI-ProteinID:
XP_052158778
LinkDB
All DBs
Position
6:complement(13091067..13102591)
Genome browser
AA seq
1529 aa
AA seq
DB search
MGTKVNIIVGSHVWAEDPENAWVDGEVVKIKGEEAEIQATNGKTITANLSKLYPKDMEAA
AGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDPHMMQQY
KGAPFGELSPHVFAVADVAYRAMIHEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRA
ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAVRTYLLE
RSRVCQISDPERNYHCFYLLCAAPQEEVEKYKLGNPKTFHYLNQSNCYELVGVSDAHEYL
ATRRAMDIVGISTQEQDAIFRVVAAILHIGNIEFAKGKEVDSSVLKDDKSKFHLDTTAEL
LMCDSGALGDALCKRVMVTPEEVIKRSLDPYNATVSRDGLAKTIYSRLFDWLVDKINSSI
GQDPNSKSLIGVLDIYGFESFKLNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEQID
WSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPKSTHETFSQKLYQTFQKHKRFVKPKL
SRTDFTICHYAGEVLYQSDQFLDKNKDYVVAEHQELLSASKCSFISGLFPPLPEETSKSS
KFSSIGARFKQQLQALMETLNSTEPHYIRCVKPNNVLKPAIFENVNVMQQLRCGGVLEAI
RISCAGYPTRRTFYEFLHRFGILAQEALEGNCDEKVACKRILEKKGLVGFQIGKTKVFLR
AGQMAELDARRTEVLGAAAKTIQGKIRTHIMRKKFVNWRKASISVQAIWRGRLACKLFDQ
MRRVAAAIKVQKNQRMHQARRSYKHLNASVLVVQTALRAMAARNTFRYKKQSKAAVKIQA
CYRCHTAHVYHKKLKRTAIVAQCRWRGKIARKELRKLKMEARETGALKEAKDKLEKKVEE
LTWRVQLEKRMRTDLEEAKAQELSKLQSSMEALQAKLDETSAKLVKEREVARAIEEAPPV
VQQTEVLVQDTEKVDSLTAEVEELKTSLQSEKQRADDLEKKRSEEQQANEEKQKKMEETD
IKMRQFQEYLRRLEEKLANVESENKVLRQQAVSMAPSKILSGRSKSILQRNAESVHVSSG
DSKAAPESNNISSPKKEFDFDDKPQKSLNEKQQENQDLLIRCIAQHLGFAGNRPVAACII
YKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNEVLAYWLSNASTLLLLLQRTLKASG
STGMAPQRRRSSSATLFGRMTQSFRGTPQGVNLSLINGSMVSGVETLRQVEAKYPALLFK
QQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLMKGSSRSNTNTAAQQALIAH
WQGIVKSLGNFLNMLKLNNVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK
AGLAELEHWCYRATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQ
LYRISTMYWDDKYGTHSVSPEVISNMRVLMTEDSNNPVSNSFLLDDDSSIPFSVDDISKS
MEQIDISDIEPPPLIRENSGFVFLLPPPE
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atggggacgaaagttaatattatagtaggttctcatgtttgggctgaagaccctgaaaat
gcctgggtcgatggagaagttgttaagatcaaaggcgaagaggccgagatccaagcaacc
aatggaaagacgatcaccgcaaatttgtcgaaactgtatcctaaagatatggaagcagct
gctggtggagttgatgatatgacaaagctatcctacctccatgaaccaggagttctgcag
aatttggcaaccagatatgaacttaatgaaatatatacatatacgggaaacattctcatc
gccgtcaatcctttccaaagattgccacatttgtatgatccacatatgatgcaacagtac
aagggagcaccatttggagagttaagtccacatgttttcgctgtggcagatgttgcatac
agagcaatgattcatgaagggaaaagcaactctattcttgtgagtggtgagagcggtgca
ggtaaaacagaaacaacaaaaatgctcatgagatatcttgcctatttgggtggccgagct
gctaccgagggaagaacagtagagcaacaagttctcgaatcaaatccagtccttgaagct
tttggcaatgctaaaactgtcagaaacaacaattctagtcggtttggtaagtttgttgag
attcagtttgataagcaagggaggatctcaggtgctgctgtgagaacttacttgctagaa
aggtcacgggtgtgccaaatttctgatcctgaacgcaactaccactgcttctatctcctt
tgtgctgcaccacaggaggaggttgagaagtacaaattaggaaatcctaagacttttcat
tatcttaatcaatcaaattgctacgagttggttggggttagtgatgctcatgaatacttg
gctaccagaagagcaatggatattgttggcatcagtactcaggaacaggatgctattttc
agggttgttgcagctatccttcatattggtaacattgagtttgccaagggcaaagaagtc
gattcctcagttttgaaagatgacaaatctaagttccaccttgacacaactgctgagctt
cttatgtgtgattctggagccttgggagatgctctttgcaagcgtgtcatggtaacacca
gaggaggttataaaaaggagccttgatccttacaatgcaactgtcagcagggacggtcta
gctaagacaatatattcccgcttgtttgactggcttgttgataaaataaacagctcaatt
ggacaagatcctaactctaaatctcttattggtgtcttggatatctatggttttgagagc
ttcaagttgaacagttttgaacaattctgtattaattatacaaatgaaaaattgcaacaa
catttcaatcagcacgttttcaagatggaacaggaagagtataccaaagaacaaattgat
tggagctatattgagtttgttgataatcaggatgttcttgaccttattgagaagaaacct
ggtggtgttattgcacttctagatgaggcatgtatgtttcctaagtcaacacatgagact
ttttcccagaagctgtaccagacatttcaaaaacacaaacggtttgtcaaaccaaagcta
tctcgcacagattttacaatctgtcactacgctggagaggtgttgtatcaatctgaccaa
ttccttgacaaaaacaaagactatgttgtggccgagcaccaggagttactaagtgcttcc
aaatgctcgtttatctctggactttttcctcctctgccagaggaaacatccaaatcctcc
aagttctcttctattggagcacgcttcaagcaacaacttcaagctcttatggaaacacta
aactctacagaacctcattatatcagatgtgtcaagccaaacaatgtgctaaaaccggcg
atttttgagaatgtcaatgtcatgcaacagttgcgttgtggtggtgtacttgaggcaatc
aggatcagctgtgcaggttatcctacacgtcgcacattttatgagtttttgcatcgcttt
ggaatacttgctcaagaggcccttgaaggaaattgcgacgaaaaggttgcatgcaagagg
attcttgaaaagaagggtcttgtgggatttcagataggcaaaacaaaagtttttctgaga
gctggccagatggccgaattagacgctaggagaactgaagtgctcggtgctgcggcaaaa
acgattcaagggaaaatacggacacatatcatgcggaagaagtttgttaattggaggaag
gcatctatatctgttcaggcaatatggagaggaagattggcttgtaaactgtttgatcaa
atgcgaagggtagcagctgccatcaaagttcagaagaaccaacgtatgcatcaggctagg
aggtcctataaacacctaaatgcttcggttcttgtagtgcaaacggctctgcgagcgatg
gcagcaagaaatacgttcagatacaagaagcagtctaaggcagcagttaaaattcaggcc
tgttataggtgccatacagctcatgtgtaccataagaagttgaaacgcacagccattgtt
gcgcaatgtagatggagaggaaagattgcaaggaaggaactcagaaaacttaaaatggaa
gctagagaaacaggtgctctcaaggaagcaaaggataaactcgaaaagaaagtggaagaa
cttacatggcgtgtgcagttagagaagagaatgaggacagacttggaagaagcaaaagca
caggagttgtcaaaactgcagagctctatggaagctctgcaggctaaattggacgagaca
agtgcaaagcttgttaaggaaagagaagttgctagggctattgaggaggcacctcctgta
gtgcaacaaactgaggttctagtccaggacactgaaaaggttgattccttgacagcagag
gtggaagaacttaagacctcactacaatcagaaaaacaaagagcggatgatttggaaaaa
aaacgctctgaagaacaacaagcaaatgaagaaaaacaaaagaaaatggaagagactgat
ataaaaatgcgtcaattccaggaatatcttagaaggttagaggagaagctcgctaatgta
gagtctgagaataaagtccttcgtcagcaagctgtctcaatggctccaagtaaaattttg
tcaggccgttccaagtccattttacagaggaatgcagaaagtgttcatgtatcaagcggc
gattcgaaagcagccccagagtccaataacatatcctctcctaaaaaggaatttgacttc
gatgataagccacagaagtcacttaatgaaaagcagcaggaaaatcaagatctattaatt
aggtgcattgctcagcatttgggctttgctggaaatcggccagtcgctgcttgcatcata
tacaagtgccttcttcactggagatcatttgaagtagagaggacaagtgtttttgaccgc
attattcagaccatcggtcatgctattgagacacaggacaacaacgaagtcttagcatat
tggctctcaaatgcttcaacacttctgctgctgcttcaaaggacactgaaggcaagtgga
tcaacagggatggctccgcagcgacggagatcgtcatctgccactctttttggaaggatg
acccagagcttcagaggaactccccaaggtgtaaatctttctctgataaatgggagcatg
gttagtggagtagagactctacgacaagtcgaagccaagtatccggcgttgttgtttaag
cagcaacttacggcgtatgtggaaaagatatatggaatgatccgggacaatttgaagaaa
gagatctctcctttgcttggtttgtgcattcaggcaccaagaacatcaagagcaagcttg
atgaaaggatcttcacgttcaaacacaaatacggccgcacaacaagctttgattgctcac
tggcaagggattgtaaagagccttggaaatttcttaaacatgctgaaattgaacaatgtt
cctccatttttggtacgaaaggtattcactcagatattctcattcatcaacgtacagctt
tttaacagtctgctgttgagaagggagtgctgttcgttcagcaatggtgagtatgtaaaa
gcaggattagctgaactcgagcattggtgctatcgagctaccgatgagtatgcaggttca
gcctgggacgaactcaaacatattagacaagctattggtttcctggtgattcatcaaaag
ccaaagaaaacgttggatgaaataagtcatgacctttgtccagtacttagtatacaacag
ttatacaggatcagtactatgtactgggatgataagtatggaacacacagcgtgtcccca
gaggttatatcaaacatgagagtattaatgactgaagactctaacaatcctgtgagcaat
tcatttcttctggatgacgactcgagtatacctttctccgtcgatgatatatccaaatcg
atggagcagattgacatttctgacattgaaccacctccgctcattcgagagaactcaggc
tttgtatttctgttgccgccccctgaataa
DBGET
integrated database retrieval system