Oryza glaberrima (African rice): 127776484
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Entry
127776484 CDS
T08853
Name
(RefSeq) PHAF1 protein At3g51130 isoform X1
KO
K27411
phagosome assembly factor 1
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127776484
Membrane trafficking [BR:
ogl04131
]
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Other autophagy associated proteins
Others
127776484
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Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
127776484
NCBI-ProteinID:
XP_052158828
LinkDB
All DBs
Position
6:complement(28510779..28515237)
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AA seq
437 aa
AA seq
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MQAHRSPAMVGGGGAGAVGPPSPATVPVRRRCEGTAMGAITLDLRPGNGVGPFTLGMPIS
DAFAQIEGQPTLYDVVHVKYFDEEPLKLDFVISFPDHGFHLRFDPWSQRLRLIEIYDVKR
LQLRYAKSLIGGPSTLATFVAVYGLFGPTFPGIYDKERGIYTLFYPGLSFAFPIPSQYTN
LFTNGEESQLSSLIVMAVADLPLEFPDGTTPVTCRVSIYDSSTDSKVGVGSLMDKAVVPA
LPAGSLYMEEVHAKLGEELLFTIGGQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSA
SDPRPRTTLCGDYFYNYFSRGIDILFDGQTHRIKKFVLHTNFPGHSDFNSYMKCNFVIYD
AEAEGTDQPGSIPKSCITPRTKWEQVKEILGDCGRAAIQTQGSMNNPFGSTFVYGYQNIA
FEVMKNGYIATVTLFQS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcacagatcgccggcgatggtggggggcggcggcgcgggggccgtcgggccg
ccgtcgccggcgacggtgccggtgaggcggcgctgcgagggcacggccatgggggccatc
acgctcgacctccgccccggcaacggcgtcgggcccttcaccctcgggatgccgatttcc
gatgcgttcgcgcagatagagggccagccaacactctacgacgttgtccacgtgaagtac
ttcgatgaggagcctctaaagttggattttgtcataagctttcctgaccatgggttccac
ctgcgcttcgatccttggtcacagaggctccgtctcattgagatctatgacgtgaaaaga
ctgcaactgcgatatgcaaagtccttaattggtggcccatcaacattagccacttttgtg
gctgtttatggattattcggacctactttcccgggtatatatgacaaagagaggggcatt
tacaccctcttctatccagggttatcctttgcgttccctatccccagccaatatacaaat
ttgtttaccaatggggaagaatctcagctcagctccctaattgttatggcagtggcagat
ttgcctctggaatttcctgacggaacaacccctgttacttgccgggtttctatatatgac
agttcaacggatagcaaagttggggttggatcactgatggataaagcagttgttcctgca
ttacctgcaggcagcctgtacatggaggaagtgcatgcaaagcttggtgaagagcttttg
ttcacgataggcgggcaacatattcctttcggtgcatcaccccaggacgtgtggactgag
ttgggtcgtccatgtggcatccaccagaagcaggttgaccagatggtaatacattcagca
tcagacccccgccctcggacaactctttgtggggattacttttacaactacttctctcgt
ggtattgatatcttatttgatgggcagacacacaggataaagaagtttgtgttacacaca
aacttccctggtcattcagatttcaattcctatatgaaatgtaactttgttatctatgat
gccgaagctgaagggacagatcagcctggtagtatccctaagagttgcataacgcctcgc
acaaagtgggaacaagtcaaggagatccttggtgattgtggtcgagcagcaatccagacg
caaggctccatgaacaatccatttgggtcaacttttgtctatggatatcagaatattgct
tttgaggtcatgaaaaatggatatattgcaactgtgaccctcttccaatcatga
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